RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 WSB1Q9Y6I7 421 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 WRBO00258 174 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 TXNL1O43396 289 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 CD55P08174 381 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 ZNF16P17020 682 aaPredicted RBP13.25□□□□□ -0.29
USH1C-204ENST00000526313 TNFSF4P23510 183 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 F2RL1P55085 397 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 SRSF3P84103 164 aaKnown RBP13.25□□□□□ -0.29
USH1C-204ENST00000526313 EDDM3AQ14507 147 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 STUMQ69YW2 141 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 WFDC8Q8IUA0 241 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 ZNF561Q8N587 486 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 ZNRF1Q8ND25 227 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 VKORC1Q9BQB6 163 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 HRH4Q9H3N8 390 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 CACFD1Q9UGQ2 172 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 JPT1Q9UK76 154 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 FAM90A26D6RGX4 464 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 ABCD4O14678 606 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 YPEL1O60688 119 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 DYNLT3P51808 116 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 AKR1C2P52895 323 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 LOXL3P58215 753 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 CATR1Q13166 79 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 ADIPOQQ15848 244 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 RNASE11Q8TAA1 199 aaKnown RBP13.24□□□□□ -0.29
USH1C-204ENST00000526313 YPEL2Q96QA6 119 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 DSCAMO60469 2012 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 SYNGR2O43760 224 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 RAMP3O60896 148 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 ASCL1P50553 236 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 TAS2R30P59541 319 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 BSPH1Q075Z2 132 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 MORN2Q502X0 79 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 FAM201AQ5SY85 155 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 Q6ZRG5 221 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 OR5C1Q8NGR4 320 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 EDARADDQ8WWZ3 215 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 C14orf79Q96F83 325 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 DIRC2Q96SL1 478 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 HSD17B10Q99714 261 aaKnown RBP13.24□□□□□ -0.29
USH1C-204ENST00000526313 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 SH3BGRL2Q9UJC5 107 aa13.24□□□□□ -0.29
USH1C-204ENST00000526313 USF3Q68DE3 2245 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 IGHV3-43A0A0B4J1X8 118 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 TOR1AO14656 332 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 NXPH3O95157 252 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 APOC3P02656 99 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 IGHV3-43DP0DP04 118 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 CD80P33681 288 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 RPL23AP62750 156 aaKnown RBP13.23□□□□□ -0.29
USH1C-204ENST00000526313 SWI5Q1ZZU3 235 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 TEX36Q5VZQ5 186 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 ZNF808Q8N4W9 903 aaPredicted RBP13.23□□□□□ -0.29
USH1C-204ENST00000526313 RND1Q92730 232 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 MS4A7Q9GZW8 240 aaPredicted RBP13.23□□□□□ -0.29
USH1C-204ENST00000526313 OR6C3Q9NZP0 311 aa13.23□□□□□ -0.29
USH1C-204ENST00000526313 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
USH1C-204ENST00000526313 C17orf98A8MV24 154 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 ITGB1BP1O14713 200 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 PROP1O75360 226 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 CST7O76096 145 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 CLDN1O95832 211 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 CD5P06127 495 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 OMGP23515 440 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 SULT1A1P50225 295 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 CLINT1Q14677 625 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 SPAG16Q8N0X2 631 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 HSD17B11Q8NBQ5 300 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 PSG11Q9UQ72 335 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 TRIM77I1YAP6 450 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 ST8SIA5O15466 376 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 OR4A8P0C604 315 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 ADCYAP1P18509 176 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 C17orf58Q2M2W7 97 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 MIDNQ504T8 468 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 ZNF788Q6ZQV5 615 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 GAFA1Q96PS6 74 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 ESRP2Q9H6T0 727 aaKnown RBP13.22□□□□□ -0.29
USH1C-204ENST00000526313 GAB2Q9UQC2 676 aa13.22□□□□□ -0.29
USH1C-204ENST00000526313 CARHSP1Q9Y2V2 147 aaKnown RBP13.22□□□□□ -0.29
USH1C-204ENST00000526313 LINC00473A8K010 186 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 C17orf100A8MU93 164 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 ATG12O94817 140 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 MUC1P15941 1255 aaPredicted RBP13.21□□□□□ -0.29
USH1C-204ENST00000526313 ATP6V0CP27449 155 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 ATRAIDQ6UW56 229 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 COMMD1Q8N668 190 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 WFIKKN1Q96NZ8 548 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 LINC00574Q9H8X3 128 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 ICE1Q9Y2F5 2266 aa13.21□□□□□ -0.29
USH1C-204ENST00000526313 CLDN14O95500 239 aa13.21□□□□□ -0.3
USH1C-204ENST00000526313 CYB5R3P00387 301 aaPredicted RBP13.21□□□□□ -0.3
USH1C-204ENST00000526313 ID4P47928 161 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms