RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CMTM3Q96MX0 182 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 URM1Q9BTM9 101 aaKnown RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 CENPOQ9BU64 300 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 DPCDQ9BVM2 203 aaPredicted RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 IFT22Q9H7X7 185 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 ABRACLQ9P1F3 81 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 STEAP1Q9UHE8 339 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 MRPS28Q9Y2Q9 187 aaKnown RBP5.12□□□□□ -1.59
CD44-221ENST00000526000 ETV7Q9Y603 341 aa5.12□□□□□ -1.59
CD44-221ENST00000526000 A0A0A6YYH2 397 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 A0A1W2PP11 408 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 METTL21EPA6NDL7 271 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 A6NJ64 397 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 OVOL1O14753 267 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 GEMIN2O14893 280 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 CA11O75493 328 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 OR7C1O76099 320 aaPredicted RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 CSN2P05814 226 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 RAB6AP20340 208 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 SLC6A1P30531 599 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 SOX6P35712 828 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 SERPINB10P48595 397 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 RORCP51449 518 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 ZNF134P52741 427 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 PAX5Q02548 391 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 ZNF816Q0VGE8 651 aaPredicted RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 KIAA0141Q14154 515 aaPredicted RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 MPV17LQ2QL34 196 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 GLIPR1L1Q6UWM5 242 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 Q8N6K4 173 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 ZNF491Q8N8L2 437 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 OR4K15Q8NH41 348 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 OR1L1Q8NH94 360 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 C4orf3Q8WVX3 66 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 RTN4IP1Q8WWV3 396 aaPredicted RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 FAM3DQ96BQ1 224 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 ISOC1Q96CN7 298 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 DGCR14Q96DF8 476 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 GON7Q9BXV9 100 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 RBM38Q9H0Z9 239 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 DCSTAMPQ9H295 470 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 PARP11Q9NR21 331 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 LIN7CQ9NUP9 197 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 GFOD1Q9NXC2 390 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 CCDC59Q9P031 241 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 RABL2AQ9UBK7 228 aaPredicted RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 RSL24D1Q9UHA3 163 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 ZNF107Q9UII5 783 aaPredicted RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 RAB22AQ9UL26 194 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 RABL2BQ9UNT1 228 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 ST3GAL6Q9Y274 331 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 AK6Q9Y3D8 172 aaKnown RBP5.11□□□□□ -1.59
CD44-221ENST00000526000 CEPT1Q9Y6K0 416 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 A3GALT2U3KPV4 340 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 SORL1Q92673 2214 aa5.11□□□□□ -1.59
CD44-221ENST00000526000 LCE6AA0A183 80 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 SHISA3A0PJX4 238 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 TMEM30CPA0ZSE6 113 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 TMEM14DPA8MWL7 114 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 H3BMQ9 156 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 C15orf65H3BRN8 121 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 LDLRAD4O15165 306 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 TPPPO94811 219 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 IGHV3-11P01762 117 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 IGHG4P01861 327 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 MT-ND4P03905 459 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 SNRPBP14678 240 aaKnown RBP5.1□□□□□ -1.59
CD44-221ENST00000526000 GP9P14770 177 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 ZNF182P17025 639 aaPredicted RBP5.1□□□□□ -1.59
CD44-221ENST00000526000 GZMHP20718 246 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 SERPINA2P20848 420 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 CD1BP29016 333 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 RPS19P39019 145 aaKnown RBP5.1□□□□□ -1.59
CD44-221ENST00000526000 RAB9AP51151 201 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 RBM11P57052 281 aaKnown RBP5.1□□□□□ -1.59
CD44-221ENST00000526000 VBP1P61758 197 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 NCS1P62166 190 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 RPS27AP62979 156 aaKnown RBP5.1□□□□□ -1.59
CD44-221ENST00000526000 CFHR3Q02985 330 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 ZNF616Q08AN1 781 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 MMDQ15546 238 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 SLC22A6Q4U2R8 563 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 CT45A1Q5HYN5 189 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 RAB12Q6IQ22 244 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 MZT2AQ6P582 158 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 OR52L2PQ8NGH6 319 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 OR56B1Q8NGI3 324 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 CT45A3Q8NHU0 189 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 ARPC1AQ92747 370 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 MS4A10Q96PG2 267 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 CLCC1Q96S66 551 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 GFI1Q99684 422 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 TM2D1Q9BX74 207 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 TMEM59Q9BXS4 323 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 NCOR1P1Q9H4R4 102 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 ZMAT4Q9H898 229 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 LINC00574Q9H8X3 128 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 GNG12Q9UBI6 72 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms