RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RGS12O14924 1447 aa1.23□□□□□ -2.21
CD44-215ENST00000525241 PCLOQ9Y6V0 5065 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 NAV2Q8IVL1 2488 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 CHD5Q8TDI0 1954 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 SIGLEC16A6NMB1 481 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 C9J4A7 227 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 H3BPC8 53 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 M0QYV0 167 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 UGT2B11O75310 529 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 TNFAIP8O95379 198 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 ARL14EPLP0DKL9 152 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 CDK2P24941 298 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 USF2Q15853 346 aaPredicted RBP1.22□□□□□ -2.21
CD44-215ENST00000525241 TTC33Q6PID6 262 aaPredicted RBP1.22□□□□□ -2.21
CD44-215ENST00000525241 SELENOHQ8IZQ5 122 aaKnown RBP1.22□□□□□ -2.21
CD44-215ENST00000525241 ZNF563Q8TA94 476 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 FAM210AQ96ND0 272 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 MND1Q9BWT6 205 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 MS4A12Q9NXJ0 267 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 LINC00527Q9UJ94 153 aa1.22□□□□□ -2.21
CD44-215ENST00000525241 CLUHO75153 1309 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 LINC00862A6NCI5 91 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 ARRDC5A6NEK1 342 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 SULT1C2O00338 296 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 PSMB6P28072 239 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 OPRM1P35372 400 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 LINC00313P59037 77 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 ACTBP60709 375 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 ACTG1P63261 375 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 DEFB119Q8N690 84 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 ZNF283Q8N7M2 679 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 TMEM56Q96MV1 263 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 UGT2B28Q9BY64 529 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 NDUFB11Q9NX14 153 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 CD300AQ9UGN4 299 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 CFAP45Q9UL16 551 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 ANKRD17O75179 2603 aaKnown RBP1.21□□□□□ -2.22
CD44-215ENST00000525241 ABCA2Q9BZC7 2435 aa1.21□□□□□ -2.22
CD44-215ENST00000525241 ZNF638Q14966 1978 aaKnown RBP1.2□□□□□ -2.22
CD44-215ENST00000525241 IGKV2-29A2NJV5 120 aaPredicted RBP1.2□□□□□ -2.22
CD44-215ENST00000525241 C11orf86A6NJI1 115 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 UBFD1O14562 309 aaKnown RBP1.2□□□□□ -2.22
CD44-215ENST00000525241 GNRH2O43555 120 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 SYNGR1O43759 233 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 CRHBPP24387 322 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 PEBP1P30086 187 aaKnown RBP1.2□□□□□ -2.22
CD44-215ENST00000525241 PSMD7P51665 324 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 LRRC26Q2I0M4 334 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 XKRXQ6PP77 449 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 AGTRAPQ6RW13 159 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 C2orf91Q6ZV80 131 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 OR4X2Q8NGF9 303 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 FNDC9Q8TBE3 224 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 SPACA4Q8TDM5 124 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 TRNT1Q96Q11 434 aaKnown RBP1.2□□□□□ -2.22
CD44-215ENST00000525241 BBS2Q9BXC9 721 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 EURLQ9NYK6 297 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 DNAJC12Q9UKB3 198 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 SETD2Q9BYW2 2564 aaPredicted RBP1.2□□□□□ -2.22
CD44-215ENST00000525241 ARHGAP32A7KAX9 2087 aa1.2□□□□□ -2.22
CD44-215ENST00000525241 RAD50Q92878 1312 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 DENND4BO75064 1496 aaPredicted RBP1.19□□□□□ -2.22
CD44-215ENST00000525241 TMEM213A2RRL7 107 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 ZW10O43264 779 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 DSCAMO60469 2012 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 CCL3P10147 92 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 NPPCP23582 126 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 OR1E2P47887 323 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 HINT1P49773 126 aaPredicted RBP1.19□□□□□ -2.22
CD44-215ENST00000525241 DMTNQ08495 405 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 SYCP1Q15431 976 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.19□□□□□ -2.22
CD44-215ENST00000525241 GLT6D1Q7Z4J2 308 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 PLCZ1Q86YW0 608 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 SLC35F6Q8N357 371 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 OR7G1Q8NGA0 311 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 OR51H1Q8NH63 302 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 TNFAIP8L1Q8WVP5 186 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 MRPS24Q96EL2 167 aaKnown RBP1.19□□□□□ -2.22
CD44-215ENST00000525241 ABHD14BQ96IU4 210 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 ATP6V1G3Q96LB4 118 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 TIMM21Q9BVV7 248 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 MED28Q9H204 178 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 HHLA2Q9UM44 414 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 SNX12Q9UMY4 172 aa1.19□□□□□ -2.22
CD44-215ENST00000525241 LRPPRCP42704 1394 aaKnown RBP1.19□□□□□ -2.22
CD44-215ENST00000525241 CR1P17927 2039 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 MYO18BQ8IUG5 2567 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 KIAA1109Q2LD37 5005 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 HECW2Q9P2P5 1572 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 IGHV3-15A0A0B4J1V0 119 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 GRIFINA4D1Z8 144 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 TMEM235A6NFC5 223 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 SMLR1H3BR10 107 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 MPZL2O60487 215 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 IGLV3-27P01718 113 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 GPX1P07203 203 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 ATP6V0CP27449 155 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 PMS2P3Q13401 168 aa1.18□□□□□ -2.22
CD44-215ENST00000525241 RBM48Q5RL73 367 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms