RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 OR1L1Q8NH94 360 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 TAF15Q92804 592 aaKnown RBP eCLIP9.32□□□□□ -0.92
HDAC9-228ENST00000524023 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
HDAC9-228ENST00000524023 RBKSQ9H477 322 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 ZDHHC11Q9H8X9 412 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 HES4Q9HCC6 221 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 KCNIP1Q9NZI2 227 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 CACNA1DQ01668 2161 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 TMEM30CPA0ZSE6 113 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 RAMP3O60896 148 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 LYZL6O75951 148 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 YIF1AO95070 293 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 OR3A1P47881 315 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 ARG2P78540 354 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 TGFBR3Q03167 851 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 TNFRSF9Q07011 255 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 PNRC1Q12796 327 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-228ENST00000524023 DHRS13Q6UX07 377 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 ZNF610Q8N9Z0 462 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 ZBTB34Q8NCN2 500 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 C5orf30Q96GV9 206 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 P2RX4Q99571 388 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 OR51M1Q9H341 326 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 UBE2L5PA0A1B0GUS4 154 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 MAP1LC3B2A6NCE7 125 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 C12orf77C9JDV5 145 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 CYB5BO43169 146 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 P0C879 139 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 SP9P0CG40 484 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 MPV17P39210 176 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 CDX1P47902 265 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-228ENST00000524023 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
HDAC9-228ENST00000524023 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-228ENST00000524023 PLA2G2CQ5R387 149 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 FIP1L1Q6UN15 594 aaKnown RBP9.31□□□□□ -0.92
HDAC9-228ENST00000524023 MRGPRGQ86SM5 289 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 GALMQ96C23 342 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 MAP1LC3BQ9GZQ8 125 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 OR2D2Q9H210 308 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 TMEM242Q9NWH2 141 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 DOK5Q9P104 306 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 HSPB7Q9UBY9 170 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 TINAGQ9UJW2 476 aa9.31□□□□□ -0.92
HDAC9-228ENST00000524023 C1QTNF9BB2RNN3 333 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 MLNRO43193 412 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 CLDN1O95832 211 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 G6PCP35575 357 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 ELLP55199 621 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 NDUFA6P56556 154 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 PMP22Q01453 160 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HES3Q5TGS1 186 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 OR8G2PQ6IF36 304 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 FAM53AQ6NSI3 398 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 TMPRSS7Q7RTY8 843 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 GCNT2Q8N0V5 402 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 TMEM178AQ8NBL3 297 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 KLF14Q8TD94 323 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 TOLLIPQ9H0E2 274 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 SDF2L1Q9HCN8 221 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 OBP2BQ9NPH6 170 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 MIOXQ9UGB7 285 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 DOCK11Q5JSL3 2073 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 DSPP15924 2871 aaKnown RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 OOEPA6NGQ2 149 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 IFITM10A6NMD0 228 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 CEBPZOSA8MTT3 80 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 WNT9BO14905 357 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BKO60814 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 KRASP01116 189 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 IFNA1P01562 189 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BJP06899 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BOP23527 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 IL2RGP31785 369 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BBP33778 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 RND2P52198 227 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BDP58876 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BCP62807 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 AESQ08117 197 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 ZNF816Q0VGE8 651 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 PMS2P11Q13670 270 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 MSMO1Q15800 293 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST2H2BEQ16778 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 OR2B11Q5JQS5 317 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 SLC35E4Q6ICL7 350 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 INO80CQ6PI98 192 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 ZNF826PQ6ZT77 177 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 CENPVQ7Z7K6 275 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 CXorf67Q86X51 503 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 C11orf53Q8IXP5 236 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 RPP25LQ8N5L8 163 aaKnown RBP9.3□□□□□ -0.92
HDAC9-228ENST00000524023 OR52L2PQ8NGH6 319 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BHQ93079 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BNQ99877 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 HIST1H2BMQ99879 126 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 CLCF1Q9UBD9 225 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 TIMM9Q9Y5J7 89 aa9.3□□□□□ -0.92
HDAC9-228ENST00000524023 BDP1A6H8Y1 2624 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms