RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	ZNF544	Q6NX49	715 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	C22orf39	Q6P5X5	142 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	CEMP1	Q6PRD7	247 aa	Predicted RBP	3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	PRSS58	Q8IYP2	241 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	ENTHD1	Q8IYW4	607 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	CD177	Q8N6Q3	437 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	DCAF4L2	Q8NA75	395 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	RXFP4	Q8TDU9	374 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	ABHD3	Q8WU67	409 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	RNF133	Q8WVZ7	376 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	NELFB	Q8WX92	580 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	RERG	Q96A58	199 aa	Predicted RBP	3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	CHMP6	Q96FZ7	201 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	MRAP2	Q96G30	205 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	SLC35E1	Q96K37	410 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	TMEM56	Q96MV1	263 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	BIRC8	Q96P09	236 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	TMEM243	Q9BU79	118 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	CHAC1	Q9BUX1	264 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	SFXN3	Q9BWM7	321 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	DAZ3	Q9NR90	486 aa	Known RBP	3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	DNAJC27	Q9NZQ0	273 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	RAB22A	Q9UL26	194 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	ORC6	Q9Y5N6	252 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	OR51B4	Q9Y5P0	310 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	DSCAM	O60469	2012 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	CCDC88C	Q9P219	2028 aa		3.17	□□□□□ -1.9
SREK1-213	ENST00000523655	HERC1	Q15751	4861 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	LCE6A	A0A183	80 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	NDUFS5	O43920	106 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	UGT2B11	O75310	529 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	RP2	O75695	350 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	IGLV3-27	P01718	113 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	UQCRH	P07919	91 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	TSPO	P30536	169 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	SSTR5	P35346	364 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	APLNR	P35414	380 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	GCLM	P48507	274 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	ZNF136	P52737	540 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	DLX6	P56179	175 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	RBMY1F	Q15415	496 aa	Known RBP	3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	IL17A	Q16552	155 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	C6orf99	Q4VX62	202 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	OTP	Q5XKR4	325 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	C6orf120	Q7Z4R8	191 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	PSMF1	Q92530	271 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	ANP32B	Q92688	251 aa	Known RBP	3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	HGD	Q93099	445 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	DDIT4L	Q96D03	193 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	KCNS1	Q96KK3	526 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	MAGEB18	Q96M61	343 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	METTL26	Q96S19	204 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	TIMM17A	Q99595	171 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	GPR22	Q99680	433 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	TIPIN	Q9BVW5	301 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	CDC42EP4	Q9H3Q1	356 aa	Known RBP	3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	ZNF225	Q9UK10	706 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	TBL2	Q9Y4P3	447 aa	Known RBP	3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	DNAH9	Q9NYC9	4486 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	KIAA1109	Q2LD37	5005 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	SPTB	P11277	2137 aa		3.16	□□□□□ -1.9
SREK1-213	ENST00000523655	STAB2	Q8WWQ8	2551 aa		3.15	□□□□□ -1.9
SREK1-213	ENST00000523655	MED12	Q93074	2177 aa		3.15	□□□□□ -1.9
SREK1-213	ENST00000523655		F5H5T6	163 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	SS18L1	O75177	396 aa	Predicted RBP	3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	BCHE	P06276	602 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	PVALB	P20472	110 aa	Predicted RBP	3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	ERF	P50548	548 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	CLDN12	P56749	244 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	PPP1CA	P62136	330 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	CRADD	P78560	199 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	GTF2B	Q00403	316 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	IFITM3	Q01628	133 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	NAB1	Q13506	487 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	TBC1D28	Q2M2D7	210 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	COX19	Q49B96	90 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	SAPCD1	Q5SSQ6	148 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	C10orf107	Q8IVU9	208 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	BLNK	Q8WV28	456 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	S100PBP	Q96BU1	408 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	OR2M4	Q96R27	311 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	ULBP1	Q9BZM6	244 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	DIABLO	Q9NR28	239 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	TAS2R13	Q9NYV9	303 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	CELA1	Q9UNI1	258 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	NUP210L	Q5VU65	1888 aa		3.15	□□□□□ -1.91
SREK1-213	ENST00000523655	IGHV3-66	A0A0C4DH42	116 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	C3orf84	H3BNL1	204 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	MANBA	O00462	879 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	ATP5H	O75947	161 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	SRP14	P37108	136 aa	Known RBP	3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	CDKN2C	P42773	168 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	CAPZB	P47756	277 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	CYP24A1	Q07973	514 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	ERCC8	Q13216	396 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	PNOC	Q13519	176 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	WDR59	Q6PJI9	974 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	UGT2A3	Q6UWM9	527 aa		3.14	□□□□□ -1.91
SREK1-213	ENST00000523655	FAM183BP	Q6ZVS7	135 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms