RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 ZDHHC11Q9H8X9 412 aa3.09□□□□□ -1.91
CTNNA1-238ENST00000523298 MARCH5Q9NX47 278 aa3.09□□□□□ -1.91
CTNNA1-238ENST00000523298 DOK5Q9P104 306 aa3.09□□□□□ -1.91
CTNNA1-238ENST00000523298 ING4Q9UNL4 249 aa3.09□□□□□ -1.91
CTNNA1-238ENST00000523298 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
CTNNA1-238ENST00000523298 IGSF9BQ9UPX0 1349 aa3.09□□□□□ -1.91
CTNNA1-238ENST00000523298 ABCC12Q96J65 1359 aa3.09□□□□□ -1.92
CTNNA1-238ENST00000523298 SCN9AQ15858 1988 aa3.09□□□□□ -1.92
CTNNA1-238ENST00000523298 PSME4Q14997 1843 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 CDK5RAP2Q96SN8 1893 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 A0A0J9YXY3 114 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 LINC00862A6NCI5 91 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SMKR1H3BMG3 65 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 M0R1B8 84 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 ZNF593O00488 134 aaPredicted RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 CCL21O00585 134 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 NME4O00746 187 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TRAF3IP2O43734 574 aaPredicted RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 EEDO75530 441 aaKnown RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SCO1O75880 301 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 IFNA17P01571 189 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 IGHV2-5P01817 119 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 IGKV5-2P06315 115 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 MPC1LP0DKB6 136 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 ZNF250P15622 560 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 COX5AP20674 150 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 APLNRP35414 380 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 GGT2P36268 569 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 OR1E2P47887 323 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 REG1BP48304 166 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 NCALDP61601 193 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 PPP1CBP62140 327 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 HIST1H3AP68431 136 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 H3F3AP84243 136 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 BAXQ07812 192 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SHHQ15465 462 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TAF9Q16594 264 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 NSUN5P1Q3KNT7 163 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TFDP3Q5H9I0 405 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 VAX1Q5SQQ9 334 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 C1orf194Q5T5A4 169 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TEX36Q5VZQ5 186 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 LAMTOR1Q6IAA8 161 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 OR10K2Q6IF99 312 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TNFAIP8L2Q6P589 184 aaPredicted RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 DCUN1D2Q6PH85 259 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 XKRXQ6PP77 449 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 RNF165Q6ZSG1 346 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 RFLNAQ6ZTI6 216 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 HIST2H3AQ71DI3 136 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 FA2HQ7L5A8 372 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 STRADAQ7RTN6 431 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SH2D6Q7Z4S9 175 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 CTAGE3PQ8IX95 158 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 C6orf223Q8N319 242 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 C9orf62Q8N4C0 152 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TMEM252Q8N6L7 170 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 GDPD1Q8N9F7 314 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SLC30A7Q8NEW0 376 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 OR4K17Q8NGC6 315 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 NAT14Q8WUY8 206 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 LRRC58Q96CX6 371 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 DDIT4LQ96D03 193 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 ZMYND19Q96E35 227 aaPredicted RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 FCRL1Q96LA6 429 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 BIRC8Q96P09 236 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 OR7D2Q96RA2 312 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 EFCAB11Q9BUY7 163 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 HES7Q9BYE0 225 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SLC25A39Q9BZJ4 359 aaPredicted RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 FBXL15Q9H469 300 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 RNF167Q9H6Y7 350 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 REEP1Q9H902 201 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 PDFQ9HBH1 243 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 SH2D2AQ9NP31 389 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 MED29Q9NX70 200 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 TRMT112Q9UI30 125 aaKnown RBP3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 GNPTGQ9UJJ9 305 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 CES1P1Q9UKY3 287 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 BAIAP2Q9UQB8 552 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 UGT2A1Q9Y4X1 527 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 MYH2Q9UKX2 1941 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 MED23Q9ULK4 1368 aa3.08□□□□□ -1.92
CTNNA1-238ENST00000523298 LRP4O75096 1905 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 MYH8P13535 1937 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 NKX2-6A6NCS4 301 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 FAM166BA8MTA8 275 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 LEUTXA8MZ59 168 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 F6UZH7 168 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 DEGS1O15121 323 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 GCM2O75603 506 aaPredicted RBP3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 PFN1P07737 140 aaKnown RBP3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 OR5AL1P0C617 328 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 UBBP0CG47 229 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 ZNF30P17039 623 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 CD34P28906 385 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 GLRXP35754 106 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 ARL2P36404 184 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 RAB38P57729 211 aa3.07□□□□□ -1.92
CTNNA1-238ENST00000523298 RAB5BP61020 215 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms