RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SLC25A48Q6ZT89 311 aaKnown RBP10.69□□□□□ -0.7
CPNE3-205ENST00000522240 SLC25A42Q86VD7 318 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 LDLRAD3Q86YD5 345 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 LINC00311Q8N616 119 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF645Q8N7E2 425 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 Q8N7P7 452 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 CCDC71LQ8N9Z2 235 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 ZBTB34Q8NCN2 500 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF596Q8TC21 504 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 TNFRSF14Q92956 283 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 AKR1E2Q96JD6 320 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 AGMATQ9BSE5 352 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 REG4Q9BYZ8 158 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 OR2D2Q9H210 308 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 GHITMQ9H3K2 345 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 METTL8Q9H825 291 aaKnown RBP10.69□□□□□ -0.7
CPNE3-205ENST00000522240 ITGB1BP2Q9UKP3 347 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 RBM7Q9Y580 266 aaKnown RBP10.69□□□□□ -0.7
CPNE3-205ENST00000522240 C7orf66A4D0T2 115 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 MSMBP08118 114 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 OR8U9P0C7N5 309 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 PRTN3P24158 256 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 S100GP29377 79 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 GNRHRP30968 328 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 DVL1P1P54792 670 aaPredicted RBP10.68□□□□□ -0.7
CPNE3-205ENST00000522240 TATDN3Q17R31 274 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 ABCA11PQ4W5N1 156 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 METTL11BQ5VVY1 283 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 FAM53AQ6NSI3 398 aaPredicted RBP10.68□□□□□ -0.7
CPNE3-205ENST00000522240 TMED4Q7Z7H5 227 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 CMTM1Q8IZ96 169 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.68□□□□□ -0.7
CPNE3-205ENST00000522240 BVESQ8NE79 360 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 OR8U1Q8NH10 309 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 OR9G1Q8NH87 305 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 TMEM230Q96A57 120 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 RTBDNQ9BSG5 229 aaPredicted RBP10.68□□□□□ -0.7
CPNE3-205ENST00000522240 SUCNR1Q9BXA5 334 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 SIRPDQ9H106 197 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 IFI27L2Q9H2X8 130 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 KCNS2Q9ULS6 477 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 INSIG2Q9Y5U4 225 aa10.68□□□□□ -0.7
CPNE3-205ENST00000522240 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
CPNE3-205ENST00000522240 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 TRAV20A0A0B4J274 112 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 A0A0B4J293 547 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 SLC31A2O15432 143 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 OR4E1P0C645 316 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 MMP9P14780 707 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 ANXA7P20073 488 aaKnown RBP10.67□□□□□ -0.7
CPNE3-205ENST00000522240 GATA3P23771 443 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 GNG10P50151 68 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 PIGPP57054 158 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 RAB25P57735 213 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 ARF6P62330 175 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 DHODHQ02127 395 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 TNP2Q05952 138 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 TMEM128Q5BJH2 165 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 CT45A1Q5HYN5 189 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 FAM71F2Q6NXP2 309 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 C11orf88Q6PI97 169 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 GLDNQ6ZMI3 551 aaPredicted RBP10.67□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF818PQ6ZRF7 136 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 OR13D1Q8NGV5 346 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 CT45A3Q8NHU0 189 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 CLEC7AQ9BXN2 247 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 MMP26Q9NRE1 261 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 CCL28Q9NRJ3 127 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 PIPOXQ9P0Z9 390 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 GAB2Q9UQC2 676 aa10.67□□□□□ -0.7
CPNE3-205ENST00000522240 ACANP16112 2415 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 CRYM-AS1A6NIL9 109 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 SNRPGP15A8MWD9 76 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 J3QR06 171 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 HSD17B6O14756 317 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 IGLV2-14P01704 120 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 PI3P19957 117 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 GPR12P47775 334 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 GZMKP49863 264 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF137PP52743 207 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 NCR3LG1Q68D85 454 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 ABHD12Q8N2K0 398 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 DRAM1Q8N682 238 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 LINC01356Q8N9X3 169 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 ADAD2Q8NCV1 583 aaKnown RBP10.66□□□□□ -0.7
CPNE3-205ENST00000522240 BEND2Q8NDZ0 799 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 LEAP2Q969E1 77 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 HEXA-AS1Q9H8Q6 139 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 LPAR2Q9HBW0 351 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 GPN1Q9HCN4 374 aaPredicted RBP10.66□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF221Q9UK13 617 aa10.66□□□□□ -0.7
CPNE3-205ENST00000522240 AMMECR1Q9Y4X0 333 aaPredicted RBP10.66□□□□□ -0.7
CPNE3-205ENST00000522240 YLPM1P49750 1951 aaKnown RBP10.65□□□□□ -0.7
CPNE3-205ENST00000522240 RNF212BA8MTL3 300 aa10.65□□□□□ -0.7
CPNE3-205ENST00000522240 RAB29O14966 203 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms