RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CATR1Q13166 79 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L9Q6RFH8 374 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 CLEC9AQ6UXN8 241 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 OR2C3Q8N628 320 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 LINC01560Q8TB33 94 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 NEUROG1Q92886 237 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 CCL13Q99616 98 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 MAGT1Q9H0U3 335 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 BARX1Q9HBU1 254 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 GNG12Q9UBI6 72 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 PSG11Q9UQ72 335 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 PCNX1Q96RV3 2341 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 F2RL2O00254 374 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 ST8SIA5O15466 376 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 FGF16O43320 207 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 IGKV1-5P01602 117 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 ADORA2A-AS1P86434 159 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 FAM216AQ8WUB2 273 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 RNF141Q8WVD5 230 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 BSCL2Q96G97 398 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 AGMATQ9BSE5 352 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 CALYQ9NYX4 217 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 YPEL1O60688 119 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 CGB3P0DN86 165 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 CGB7P0DN87 165 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 MMP9P14780 707 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 RPL30P62888 115 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 VAMP2P63027 116 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 MORN2Q502X0 79 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 EIF5AL1Q6IS14 154 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 YPEL2Q96QA6 119 aa15.34■□□□□ 0.05
TRAPPC9-210ENST00000521667 TEX46H3BTG2 121 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 WRBO00258 174 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 SIGLEC5O15389 551 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 GRNP28799 593 aaKnown RBP15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 LPAR6P43657 344 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 CAV2P51636 162 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 EWSR1Q01844 656 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■■□ 21.2
TRAPPC9-210ENST00000521667 Q6ZRM9 215 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 FAM216BQ8N7L0 139 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 UBAC2Q8NBM4 344 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 RAB9BQ9NP90 201 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 DYNLRB1Q9NP97 96 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 LYRM2Q9NU23 88 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 CACNG5Q9UF02 275 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 KIAA2026Q5HYC2 2103 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 PLCE1Q9P212 2302 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 FAM24AA6NFZ4 105 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 NXPH3O95157 252 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 APOBEC3AP31941 199 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 LOXL3P58215 753 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 NHLH2Q02577 135 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 IZUMO4Q1ZYL8 232 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 BTNL3Q6UXE8 466 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 ZNF66Q6ZN08 573 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 HSD17B13Q7Z5P4 300 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 C1orf87Q8N0U7 546 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 TCTEX1D2Q8WW35 142 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 LRRC46Q96FV0 321 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 RNF115Q9Y4L5 304 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 SESN1Q9Y6P5 492 aa15.33■□□□□ 0.04
TRAPPC9-210ENST00000521667 COL6A6A6NMZ7 2263 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 TRGV10A0A0A0MS01 117 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 TRAV38-1A0A0B4J264 116 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 NKX6-3A6NJ46 265 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 LGALS8O00214 317 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 CHST1O43916 411 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 CLDN1O95832 211 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 EFNB3Q15768 340 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 C17orf58Q2M2W7 97 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 Q3ZCU0 254 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 FGFRL1Q8N441 504 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 TCTEX1D1Q8N7M0 179 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 HSD17B10Q99714 261 aaKnown RBP15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 SLC25A31Q9H0C2 315 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 MS4A5Q9H3V2 200 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 WFDC1Q9HC57 220 aa15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 FAM212BQ9NTI7 297 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-210ENST00000521667 ARID1AO14497 2285 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 BORCS7-ASMTA0A0B4J1R7 106 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 IGSF23A1L1A6 192 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 KIAA1324LA8MWY0 1029 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 RAMP3O60896 148 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 FGF2P09038 288 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 FAM157CP0CG43 387 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 OMGP23515 440 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 OR2B11Q5JQS5 317 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 SPAG16Q8N0X2 631 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 EIF4E3Q8N5X7 224 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 POLEQ07864 2286 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 KBTBD11-OT1A0A1B0GTJ5 212 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 B9A039 149 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 TMEM178BH3BS89 294 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 TMEM50AO95807 157 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 GPR12P47775 334 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 MST1LQ2TV78 715 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 TMEM252Q8N6L7 170 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 CA5BP1Q8WTZ4 195 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 ARV1Q9H2C2 271 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 CLN8Q9UBY8 286 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms