RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ISOC2Q96AB3 205 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 RAB39BQ96DA2 213 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 ADGRG7Q96K78 797 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 CABLES2Q9BTV7 478 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 PKIBQ9C010 78 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 CTDSP1Q9GZU7 261 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 ZNF835Q9Y2P0 537 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 MMP24Q9Y5R2 645 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 DMRT1Q9Y5R6 373 aa7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 NCOA6Q14686 2063 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-223ENST00000520520 PCNX1Q96RV3 2341 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 SLC22A20A6NK97 555 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CD300LBA8K4G0 201 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 J3QW42 95 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 HSD17B6O14756 317 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 TXNL1O43396 289 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CLN5O75503 358 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 NEURL1O76050 574 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 FBP1P09467 338 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 NQO2P16083 231 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CBR1P16152 277 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 OMGP23515 440 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 F2RP25116 425 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 APLNRP35414 380 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 HAAOP46952 286 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CDX1P47902 265 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 GLIPR1P48060 266 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CYB561P49447 251 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 FHITP49789 147 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 MEOX1P50221 254 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 OR2B8PP59922 312 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 GNG3P63215 75 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 SERF2P84101 59 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 ICAM4Q14773 271 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 RNPS1Q15287 305 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 TESK1Q15569 626 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 HAGHQ16775 308 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 IGSF11Q5DX21 431 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 RNFT1Q5M7Z0 435 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 SPSB3Q6PJ21 355 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CLEC9AQ6UXN8 241 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF818PQ6ZRF7 136 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CLDND2Q8NHS1 167 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 PFDN5Q99471 154 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 GSN-AS1Q9NRJ2 163 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM242Q9NWH2 141 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CISD1Q9NZ45 108 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 OR2W1Q9Y3N9 320 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 TIMM9Q9Y5J7 89 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 LIPGQ9Y5X9 500 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 CCDC168Q8NDH2 2452 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 NF1P21359 2839 aa7.33□□□□□ -1.24
CTNNA1-223ENST00000520520 A0A1B0GV50 99 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 LRRC3CA6NJW4 275 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 PPP1R2P9O14990 202 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 LY86O95711 162 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 CYB5R3P00387 301 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 OPN1MWP04001 364 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 ARG1P05089 322 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 OPN1MW2P0DN77 364 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 OPN1MW3P0DN78 364 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 BCL2P10415 239 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 HOXA5P20719 270 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 NPBWR2P48146 333 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 CEBPGP53567 150 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 DLK1P80370 383 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 ARF1P84077 181 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 RBMS3Q6XE24 437 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 CALHM1Q8IU99 346 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 LILRB2Q8N423 598 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 RPRMLQ8N4K4 120 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 CYB561D1Q8N8Q1 229 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 APH1AQ96BI3 265 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 BTF3L4Q96K17 158 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 YPEL4Q96NS1 127 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 SPOCK3Q9BQ16 436 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 VKORC1Q9BQB6 163 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM173AQ9BQD7 235 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 RTL8AQ9BWD3 113 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 PRRG4Q9BZD6 226 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 DEFB127Q9H1M4 99 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 GLRX2Q9NS18 164 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 GFOD1Q9NXC2 390 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 TREM2Q9NZC2 230 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 MIOXQ9UGB7 285 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 POLDIP2Q9Y2S7 368 aa7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 SETD2Q9BYW2 2564 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM166BA8MTA8 275 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 CLDN34H7C241 214 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 J3QT63 122 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 CHST1O43916 411 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 SOX15O60248 233 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 PGLYRP1O75594 196 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 CST7O76096 145 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 MBP02144 154 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms