RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 AADACL4Q5VUY2 407 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 HBMQ6B0K9 141 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 HAGHLQ6PII5 290 aaPredicted RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 ALKAL2Q6UX46 152 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CASP12Q6UXS9 341 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 SVBPQ8N300 66 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CHST4Q8NCG5 386 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 PXT1Q8NFP0 134 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 OR6K3Q8NGY3 331 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 COQ8AQ8NI60 647 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 GNPDA2Q8TDQ7 276 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 ASB13Q8WXK3 278 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CPNE4Q96A23 557 aaPredicted RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 SEH1LQ96EE3 360 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 ZNF285Q96NJ3 590 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 OR4K3Q96R72 315 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CMSS1Q9BQ75 279 aaKnown RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 TSSK6Q9BXA6 273 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 SLC25A2Q9BXI2 301 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 HDHD2Q9H0R4 259 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 PLEKHA1Q9HB21 404 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 LRTM1Q9HBL6 345 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 NIT2Q9NQR4 276 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 NRBP2Q9NSY0 501 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 ACER3Q9NUN7 267 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 TAS2R13Q9NYV9 303 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 ZFYVE26Q68DK2 2539 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 FLNBO75369 2602 aaKnown RBP4.97□□□□□ -1.61
LSM1-202ENST00000520286 NLRC5Q86WI3 1866 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 OR51F1A6NGY5 319 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 FAM166BA8MTA8 275 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 SNRPGP15A8MWD9 76 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 PANO1I0J062 215 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 MANBAO00462 879 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 CA11O75493 328 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 HPRT1P00492 218 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 OXTP01178 125 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 IGLV3-25P01717 112 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 CRYBA1P05813 215 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 GP1BAP07359 652 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 ADCYAP1P18509 176 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 PTNP21246 168 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 PMELP40967 661 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 RPS10P46783 165 aaKnown RBP4.97□□□□□ -1.61
LSM1-202ENST00000520286 CXCL12P48061 93 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 RAB7AP51149 207 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 ZNF136P52737 540 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 CAV3P56539 151 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 HERVK_113P61574 105 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 ADIGQ0VDE8 80 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 EIF4EBP2Q13542 120 aaPredicted RBP4.97□□□□□ -1.61
LSM1-202ENST00000520286 IHHQ14623 411 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 ABHD12BQ7Z5M8 362 aaPredicted RBP4.97□□□□□ -1.61
LSM1-202ENST00000520286 OR6V1Q8N148 313 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 RNF175Q8N4F7 328 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 OR51L1Q8NGJ5 315 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 OR51Q1Q8NH59 317 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 CD200R1Q8TD46 325 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 LRRC29Q8WV35 223 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 RPEQ96AT9 228 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 GALNT14Q96FL9 552 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 FAM210BQ96KR6 192 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 HBEGFQ99075 208 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 DNAJC27Q9NZQ0 273 aa4.97□□□□□ -1.61
LSM1-202ENST00000520286 ZNF282Q9UDV7 671 aaPredicted RBP4.97□□□□□ -1.61
LSM1-202ENST00000520286 ARHGAP21Q5T5U3 1957 aa4.96□□□□□ -1.61
LSM1-202ENST00000520286 DOCK4Q8N1I0 1966 aa4.96□□□□□ -1.61
LSM1-202ENST00000520286 FRYLO94915 3013 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 IGHV3-64DA0A0J9YX35 117 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 TMEM218A2RU14 115 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 TRAPPC13A5PLN9 417 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 NAP1L6A6NFF2 107 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 C5orf58C9J3I9 102 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 GPR31O00270 319 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 GABRPO00591 440 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 EEF1E1O43324 174 aaKnown RBP4.96□□□□□ -1.62
LSM1-202ENST00000520286 SSNA1O43805 119 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 UBL3O95164 117 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 SIX6O95475 246 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 C1QCP02747 245 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 HLA-DPB1P04440 258 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 ZNF140P52738 457 aaPredicted RBP4.96□□□□□ -1.62
LSM1-202ENST00000520286 ZNF121P58317 390 aaPredicted RBP4.96□□□□□ -1.62
LSM1-202ENST00000520286 TAS2R60P59551 318 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 RAB5BP61020 215 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 DEFA5Q01523 94 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 MADCAM1Q13477 382 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 MPPED2Q15777 294 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 ZBTB6Q15916 424 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 FBXO48Q5FWF7 155 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 SBSNQ6UWP8 590 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 OR11G2Q8NGC1 345 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 OR8J2Q8NGG1 315 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 RXFP4Q8TDU9 374 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 FGF13Q92913 245 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 TRIB3Q96RU7 358 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 GPR21Q99679 349 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 GAL3ST2Q9H3Q3 398 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 XKR8Q9H6D3 395 aa4.96□□□□□ -1.62
LSM1-202ENST00000520286 NMNAT1Q9HAN9 279 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms