RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SLC35A2P78381 396 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 FABP5Q01469 135 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 COQ5Q5HYK3 327 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 HAVCR2Q8TDQ0 301 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 CDCA4Q9BXL8 241 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 MAP1LC3AQ9H492 121 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 ZNF391Q9UJN7 358 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 MCTS1Q9ULC4 181 aaKnown RBP2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 HDGFL3Q9Y3E1 203 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 ALG5Q9Y673 324 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 ADCY9O60503 1353 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 C9orf84Q5VXU9 1444 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 LINC00862A6NCI5 91 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 A8MWP6 167 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 CD7P09564 240 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 OR4A8P0C604 315 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 P0C880 135 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 ATP6V0CP27449 155 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 DDTP30046 118 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 HERVK_113P63121 156 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 DEFA6Q01524 100 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 ATP5L2Q7Z4Y8 100 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 DNAAF3Q8N9W5 541 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 Q8WTZ3 238 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 OR8B2Q96RD0 313 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 HES4Q9HCC6 221 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 POLR1DQ9Y2S0 133 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 MYO3BQ8WXR4 1341 aa2.68□□□□□ -1.98
HMGB1P46-201ENST00000520062 C5orf49A4QMS7 147 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 HLA-DRAP01903 254 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 PPP1CCP36873 323 aaKnown RBP2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 RPS24P62847 133 aaKnown RBP2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 CST6Q15828 149 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 SPIN4Q56A73 249 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 N4BP2L1Q5TBK1 243 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 TCF24Q7RTU0 167 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 SCXQ7RTU7 201 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 CCDC112Q8NEF3 446 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 OR10P1Q8NGE3 313 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 OR2V1Q8NHB1 315 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 MUC7Q8TAX7 377 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 TBX5Q99593 518 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 BABAM2Q9NXR7 383 aa2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 CARHSP1Q9Y2V2 147 aaKnown RBP2.67□□□□□ -1.98
HMGB1P46-201ENST00000520062 C21orf140B9A014 251 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 MRASO14807 208 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 ISG15P05161 165 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 IL3P08700 152 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 NQO1P15559 274 aaKnown RBP2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 ZNF22P17026 224 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 PPP1R1AQ13522 171 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 TAF9Q16594 264 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 NOXRED1Q6NXP6 359 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 C10orf67Q8IYJ2 551 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 JOSD2Q8TAC2 188 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 PTH2Q96A98 100 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 MS4A6EQ96DS6 147 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 UPK3BQ9BT76 320 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 UBAP1Q9NZ09 502 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 HHLA2Q9UM44 414 aa2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 V9GYY5 206 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P46-201ENST00000520062 NUP205Q92621 2012 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 IGSF23A1L1A6 192 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 MYL12AP19105 171 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 RPL12P30050 165 aaKnown RBP2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR10J1P30954 320 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 CA7P43166 264 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 DAPP51397 102 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 AP2S1P53680 142 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 HLA-DRB3P79483 266 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 GNA13Q14344 377 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 CD200R1LQ6Q8B3 271 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 SDIM1Q6ZPB5 146 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 NAA40Q86UY6 237 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR8K1Q8NGG5 319 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 GPR119Q8TDV5 335 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 RAB8BQ92930 207 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 TESCQ96BS2 214 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 CPNE2Q96FN4 548 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 NKX6-2Q9C056 277 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 SMDT1Q9H4I9 107 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 EMC3Q9P0I2 261 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 PCYT1BQ9Y5K3 369 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 CRB1P82279 1406 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 SHROOM3Q8TF72 1996 aa2.65□□□□□ -1.99
HMGB1P46-201ENST00000520062 IGKV3D-11A0A0A0MRZ8 115 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 DHRS12A0PJE2 317 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 SMIM23A6NLE4 172 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 TP53I11O14683 189 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 ACOX3O15254 700 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 MT-CO2P00403 227 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 CRYGDP07320 174 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 RGS21Q2M5E4 152 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 LPCAT4Q643R3 524 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 ZNF567Q8N184 647 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR2D3Q8NGH3 330 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms