RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
CSMD1-205ENST00000519623 ABRACLQ9P1F3 81 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 VSIG4Q9Y279 399 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
CSMD1-205ENST00000519623 TRBV6-6A0A0A6YYG2 114 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 TRAV41A0A0B4J266 112 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 ST8SIA5O15466 376 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-205ENST00000519623 ECI1P42126 302 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 GNB1P62873 340 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF260Q3ZCT1 412 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 HSD17B12Q53GQ0 312 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 RPL39P5Q59GN2 51 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 C19orf54Q5BKX5 351 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 TMEM65Q6PI78 240 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 TMEM91Q6ZNR0 172 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 WWC2-AS2Q96NR7 200 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 GFI1Q99684 422 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 PARP11Q9NR21 331 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 PLEKHJ1Q9NW61 149 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 PIPOXQ9P0Z9 390 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 STEAP1Q9UHE8 339 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 SLC23A1Q9UHI7 598 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 FBXO7Q9Y3I1 522 aa9.66□□□□□ -0.86
CSMD1-205ENST00000519623 FOXI3A8MTJ6 420 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 FCN1O00602 326 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 RAB29O14966 203 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 SOCS1O15524 211 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 SOX15O60248 233 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 PROP1O75360 226 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 BPNT1O95861 308 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 EGR2P11161 476 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 CRIP2P52943 208 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 TMEM50BP56557 158 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 CX3CL1P78423 397 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 NDPQ00604 133 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 MED22Q15528 200 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 LIPKQ5VXJ0 399 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF660Q6AZW8 331 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 GLDNQ6ZMI3 551 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 OR6M1Q8NGM8 313 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 TMEM203Q969S6 136 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 ABHD14BQ96IU4 210 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 OR5B12Q96R08 314 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 HDHD3Q9BSH5 251 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 RIMS4Q9H426 269 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 FBXL15Q9H469 300 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 KIAA1456Q9P272 454 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 NKX1-2Q9UD57 310 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-205ENST00000519623 AK3Q9UIJ7 227 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
CSMD1-205ENST00000519623 STAB2Q8WWQ8 2551 aa9.65□□□□□ -0.87
CSMD1-205ENST00000519623 H0YJW9 148 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 RRHO14718 337 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 OR8U8P0C7N1 319 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
CSMD1-205ENST00000519623 MC5RP33032 325 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 CEACAM6P40199 344 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 ZNF616Q08AN1 781 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 TPBGQ13641 420 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 P2RY14Q15391 338 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 OR5AN1Q8NGI8 311 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 SETD6Q8TBK2 473 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 DCUN1D4Q92564 292 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 C11orf54Q9H0W9 315 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-205ENST00000519623 GHITMQ9H3K2 345 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 DUSP21Q9H596 190 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 CHMP1AQ9HD42 196 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-205ENST00000519623 TPSG1Q9NRR2 321 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 SCN3BQ9NY72 215 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 HSF4Q9ULV5 492 aa9.64□□□□□ -0.87
CSMD1-205ENST00000519623 OR5H14A6NHG9 310 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 ANKRD65E5RJM6 399 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 SLC17A2O00624 439 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 SCTP09683 121 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 ARSBP15848 533 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 INSL3P51460 131 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 MOB1BQ7L9L4 216 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 NRG4Q8WWG1 115 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 UFD1Q92890 307 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 PTX4Q96A99 478 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 RNF5Q99942 180 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
CSMD1-205ENST00000519623 ALX4Q9H161 411 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-205ENST00000519623 VCXQ9H320 206 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 Q9N2K0 584 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 OR1A1Q9P1Q5 309 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 ZNF256Q9Y2P7 627 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-205ENST00000519623 AK6Q9Y3D8 172 aaKnown RBP9.63□□□□□ -0.87
CSMD1-205ENST00000519623 U3KQK5 164 aa9.63□□□□□ -0.87
CSMD1-205ENST00000519623 IGKV1-6A0A0C4DH72 117 aa9.62□□□□□ -0.87
CSMD1-205ENST00000519623 A0A1W2PN81 502 aa9.62□□□□□ -0.87
CSMD1-205ENST00000519623 RBBP9O75884 186 aa9.62□□□□□ -0.87
CSMD1-205ENST00000519623 GSTP1P09211 210 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms