RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 RNF115Q9Y4L5 304 aa15.33■□□□□ 0.04
FAM49B-214ENST00000519540 B9A039 149 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 TMEM178BH3BS89 294 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 LGALS8O00214 317 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 ST8SIA5O15466 376 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 GPR137BO60478 399 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 YPEL1O60688 119 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 PITX3O75364 302 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 POLR2GP62487 172 aaKnown RBP eCLIP15.32■□□□□ 0.04
FAM49B-214ENST00000519540 RPL30P62888 115 aaKnown RBP15.32■□□□□ 0.04
FAM49B-214ENST00000519540 C1orf87Q8N0U7 546 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 EDARADDQ8WWZ3 215 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 YPEL2Q96QA6 119 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 SDHAF2Q9NX18 166 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 CISD1Q9NZ45 108 aaKnown RBP15.32■□□□□ 0.04
FAM49B-214ENST00000519540 GNG12Q9UBI6 72 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 FBXL17Q9UF56 701 aa15.32■□□□□ 0.04
FAM49B-214ENST00000519540 CACNA1AO00555 2505 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 TRAV38-1A0A0B4J264 116 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 IGKV1-5P01602 117 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 C17orf58Q2M2W7 97 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 RPL7L1Q6DKI1 246 aaKnown RBP15.31■□□□□ 0.04
FAM49B-214ENST00000519540 MAGT1Q9H0U3 335 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 EPHA1P21709 976 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 OMGP23515 440 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 LPAR6P43657 344 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 CLEC9AQ6UXN8 241 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 Q6ZRM9 215 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 RNASE11Q8TAA1 199 aaKnown RBP15.31■□□□□ 0.04
FAM49B-214ENST00000519540 CCL17Q92583 94 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 TMEM106BQ9NUM4 274 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 DSCAML1Q8TD84 2053 aa15.31■□□□□ 0.04
FAM49B-214ENST00000519540 PPIAL4EA0A075B759 164 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 KBTBD11-OT1A0A1B0GTJ5 212 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 PPIAL4DF5H284 164 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 PPIAL4FP0DN26 164 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 PVALBP20472 110 aaPredicted RBP15.3■□□□□ 0.04
FAM49B-214ENST00000519540 CATR1Q13166 79 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 IZUMO4Q1ZYL8 232 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 BTNL3Q6UXE8 466 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 FAM216AQ8WUB2 273 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 BSCL2Q96G97 398 aaPredicted RBP15.3■□□□□ 0.04
FAM49B-214ENST00000519540 CLN8Q9UBY8 286 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 PPIAL4AQ9Y536 164 aa15.3■□□□□ 0.04
FAM49B-214ENST00000519540 TRGV10A0A0A0MS01 117 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 TMEM8BA6NDV4 472 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 NKX6-3A6NJ46 265 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 TMPRSS2O15393 492 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 SSSCA1O60232 199 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 RAMP3O60896 148 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 CLDN1O95832 211 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 GAPDHP04406 335 aaKnown RBP15.29■□□□□ 0.04
FAM49B-214ENST00000519540 BRWD1-AS2P59051 145 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 EIF5AP63241 154 aaKnown RBP15.29■□□□□ 0.04
FAM49B-214ENST00000519540 TCF23Q7RTU1 214 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 OR2C3Q8N628 320 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 REG4Q9BYZ8 158 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 SMIM3Q9BZL3 60 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 RAB9BQ9NP90 201 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 MED19A0JLT2 244 aaPredicted RBP15.29■□□□□ 0.04
FAM49B-214ENST00000519540 KIAA1324LA8MWY0 1029 aaPredicted RBP15.29■□□□□ 0.04
FAM49B-214ENST00000519540 JTBO76095 146 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 AKR1C2P52895 323 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 NHLH2Q02577 135 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 SWI5Q1ZZU3 235 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 Q3ZCU0 254 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 ZNF66Q6ZN08 573 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 FGFRL1Q8N441 504 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 TMED6Q8WW62 240 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 CORO2AQ92828 525 aa15.29■□□□□ 0.04
FAM49B-214ENST00000519540 HSD17B10Q99714 261 aaKnown RBP15.29■□□□□ 0.04
FAM49B-214ENST00000519540 TANC2Q9HCD6 1990 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 CHST1O43916 411 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 PROP1O75360 226 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 NXPH3O95157 252 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 CLDN14O95500 239 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 MMP9P14780 707 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 LOXP28300 417 aaPredicted RBP15.28■□□□□ 0.04
FAM49B-214ENST00000519540 ZNF134P52741 427 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 TFF3Q07654 80 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 AANATQ16613 207 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 TCTEX1D1Q8N7M0 179 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 TCTEX1D2Q8WW35 142 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 FAM212BQ9NTI7 297 aaPredicted RBP15.28■□□□□ 0.04
FAM49B-214ENST00000519540 CACNG5Q9UF02 275 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 PFDN2Q9UHV9 154 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 COL6A6A6NMZ7 2263 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 NBASA2RRP1 2371 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 ARFGEF3Q5TH69 2177 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 PKDREJQ9NTG1 2253 aa15.28■□□□□ 0.04
FAM49B-214ENST00000519540 MFSD2BA6NFX1 497 aa15.27■□□□□ 0.04
FAM49B-214ENST00000519540 FAM24AA6NFZ4 105 aa15.27■□□□□ 0.04
FAM49B-214ENST00000519540 LINC00473A8K010 186 aa15.27■□□□□ 0.04
FAM49B-214ENST00000519540 TNFRSF13BO14836 293 aaPredicted RBP15.27■□□□□ 0.04
FAM49B-214ENST00000519540 TMEM50AO95807 157 aa15.27■□□□□ 0.04
FAM49B-214ENST00000519540 GPR12P47775 334 aa15.27■□□□□ 0.04
FAM49B-214ENST00000519540 VAMP2P63027 116 aa15.27■□□□□ 0.04
FAM49B-214ENST00000519540 ZNF672Q499Z4 452 aaPredicted RBP15.27■□□□□ 0.04
FAM49B-214ENST00000519540 OR2B11Q5JQS5 317 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms