RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TRAV9-2A0A087WT02 112 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 DHRS3O75911 302 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 IGLL1P15814 213 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 WASP42768 502 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 PSG9Q00887 426 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 RELBQ01201 579 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 MFAP5Q13361 173 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 OR8B8Q15620 311 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 PMCHL1Q16048 86 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 PIGYQ3MUY2 71 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 Q6ZRM9 215 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.56
PABPC1-208ENST00000519004 SYT13Q7L8C5 426 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 WDR5BQ86VZ2 330 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 OR10G9Q8NGN4 311 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 OR10G7Q8NGN6 311 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 GMPPAQ96IJ6 420 aaPredicted RBP11.52□□□□□ -0.56
PABPC1-208ENST00000519004 SFXN3Q9BWM7 321 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 IL36BQ9NZH7 164 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 LAMA3Q16787 3333 aa11.52□□□□□ -0.56
PABPC1-208ENST00000519004 G3V4G9 280 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 H0Y980 276 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 SYNGR2O43760 224 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 ATP5G3P48201 142 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 THBS3P49746 956 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 LGALS4P56470 323 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 PAX2Q02962 417 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.57
PABPC1-208ENST00000519004 PDE6DO43924 150 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 SLC25A6P12236 298 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 C19orf35Q6ZS72 473 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 VASH2Q86V25 355 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 NUDT22Q9BRQ3 303 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 MRPL13Q9BYD1 178 aaKnown RBP11.51□□□□□ -0.57
PABPC1-208ENST00000519004 MTIF3Q9H2K0 278 aaKnown RBP11.51□□□□□ -0.57
PABPC1-208ENST00000519004 H0YJW9 148 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 DEGS1O15121 323 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 SRD5A2P31213 254 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 RHOBP62745 196 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 ST6GALNAC3Q8NDV1 305 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 CCL4L1Q8NHW4 92 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 CHODLQ9H9P2 273 aa11.51□□□□□ -0.57
PABPC1-208ENST00000519004 IGKV1-27A0A075B6S5 117 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 SLC22A20A6NK97 555 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 ALG1L2C9J202 215 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 G3V3Y1 287 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 PMP22Q01453 160 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 TRIP6Q15654 476 aaKnown RBP11.5□□□□□ -0.57
PABPC1-208ENST00000519004 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 CCL28Q9NRJ3 127 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 CD207Q9UJ71 328 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 DNAH14Q0VDD8 3507 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 TRAV8-6A0A0B4J262 113 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 SIRPB1O00241 398 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 SLC17A3O00476 420 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 OR7C2O60412 319 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 PDCD1Q15116 288 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 C17orf99Q6UX52 265 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-208ENST00000519004 GNB1LQ9BYB4 327 aa11.5□□□□□ -0.57
PABPC1-208ENST00000519004 TRBV9A0A0B4J1U6 114 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 A0A1W2PQD3 144 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 J3QR06 171 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 TNFSF15O95150 251 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 CELA3BP08861 270 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 DEFA4P12838 97 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 MSR1P21757 451 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 IL12BP29460 328 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 FUT6P51993 359 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 GRB2P62993 217 aaKnown RBP11.49□□□□□ -0.57
PABPC1-208ENST00000519004 PSG7Q13046 419 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 IGFBP7Q16270 282 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-208ENST00000519004 SAMD13Q5VXD3 122 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 ZNF324BQ6AW86 544 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-208ENST00000519004 TMEM211Q6ICI0 200 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.49□□□□□ -0.574e-10■■■■□ 20.7
PABPC1-208ENST00000519004 ZDHHC23Q8IYP9 409 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 BATF2Q8N1L9 274 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 OR1K1Q8NGR3 316 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 TSKUQ8WUA8 353 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 TMEM186Q96B77 213 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 SMPXQ9UHP9 88 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 WASHC3Q9Y3C0 194 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 MUC21A0A0G2JKD1 596 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 MUC21A0A140T8X8 626 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 PRSS38A1L453 326 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 PPIAL4GP0DN37 164 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms