RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CCDC58Q4VC31 144 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RBM48Q5RL73 367 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 FAM201AQ5SY85 155 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 IGFL4Q6B9Z1 124 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CYB5R2Q6BCY4 276 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 C22orf42Q6IC83 251 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RPL22L1Q6P5R6 122 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 DNM1P46Q6ZS02 220 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZNF826PQ6ZT77 177 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LINC01561Q8N1V8 128 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CENPSQ8N2Z9 138 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZFP41Q8N8Y5 198 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 INO80EQ8NBZ0 244 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 C19orf18Q8NEA5 215 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR1M1Q8NGA1 313 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR5A2Q8NGI9 324 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR51A4Q8NGJ6 313 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR5D14Q8NGL3 314 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CLDND2Q8NHS1 167 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 HAVCR2Q8TDQ0 301 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 DTD1Q8TEA8 209 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LRRC29Q8WV35 223 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PACRGQ96M98 296 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 PDCD1LG2Q9BQ51 273 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 MND1Q9BWT6 205 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 METTL17Q9H7H0 456 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 ABCB9Q9NP78 766 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RNF7Q9UBF6 113 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 HHLA2Q9UM44 414 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 SLC7A11Q9UPY5 501 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 WIPI2Q9Y4P8 454 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 V9GYS6 101 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CELSR1Q9NYQ6 3014 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PRRC2AP48634 2157 aaKnown RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 HIVEP1P15822 2718 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 USF3Q68DE3 2245 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 IGHV3OR15-7A0A075B7D8 119 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OR4C45A6NMZ5 311 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 G3V4G9 280 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 TIMM23O14925 209 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 DENRO43583 198 aaKnown RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 GATBO75879 557 aaKnown RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 TNFAIP8O95379 198 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 IGLV3-1P01715 115 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 GYPAP02724 150 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 ISG15P05161 165 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 HCKP08631 526 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 IGHV4-31P0DP07 118 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 HKR1P10072 659 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 HLA-GP17693 338 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 CELP19835 753 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 CCL1P22362 96 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 GLRA1P23415 457 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 CRHBPP24387 322 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 IL2RGP31785 369 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 MAP2K4P45985 399 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 GABRA2P47869 451 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 TGM4P49221 684 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 FUT6P51993 359 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 ELLP55199 621 aaPredicted RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 WNT4P56705 351 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 TAS2R43P59537 309 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 GNG3P63215 75 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 HOXA4Q00056 320 aaPredicted RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 ZNF154Q13106 437 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 UBE2V2Q15819 145 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 KCNJ8Q15842 424 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 TMEM249Q2WGJ8 235 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 XAF1Q6GPH4 301 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 FAHD2BQ6P2I3 314 aaPredicted RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 HAGHLQ6PII5 290 aaPredicted RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 Q6YL49 198 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 MOB3BQ86TA1 216 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 WDR86Q86TI4 376 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 TMEM17Q86X19 198 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 LRRC28Q86X40 367 aaPredicted RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 ANGPTL5Q86XS5 388 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 SPICQ8N5J4 248 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 NANOGP1Q8N7R0 232 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 CCDC54Q8NEL0 328 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OR5T2Q8NGG2 359 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OR13C5Q8NGS8 318 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OR10AC1Q8NH08 325 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OR52N1Q8NH53 320 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 PLPPR1Q8TBJ4 325 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 CCDC107Q8WV48 283 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 BAALCQ8WXS3 180 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 PP6455Q8WZ26 134 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 GHSRQ92847 366 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 ISOC2Q96AB3 205 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 ADAT3Q96EY9 351 aaPredicted RBP2.26□□□□□ -2.05
SKP1-204ENST00000517691 BORCS8Q96FH0 119 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 FAHD2AQ96GK7 314 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OPALINQ96PE5 141 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 NEDD4LQ96PU5 975 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 SLC6A7Q99884 636 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 ZNF649Q9BS31 505 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 CDCA4Q9BXL8 241 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 OR51I2Q9H344 312 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 PAK1IP1Q9NWT1 392 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms