RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 SETD6Q8TBK2 473 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 IL1F10Q8WWZ1 152 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF251Q9BRH9 671 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 CHCHD6Q9BRQ6 235 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 MRPL20Q9BYC9 149 aaKnown RBP8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 GHITMQ9H3K2 345 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 AK3Q9UIJ7 227 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 BLOC1S6Q9UL45 172 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 HSF4Q9ULV5 492 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 MGAT4AQ9UM21 535 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 V9GY05 133 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 SAA2-SAA4A0A096LPE2 208 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 DPPA5A6NC42 116 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 FOXI3A8MTJ6 420 aaPredicted RBP8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 ITGB1BP1O14713 200 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 RAB29O14966 203 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 IGF1P05019 195 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 SAA2P0DJI9 122 aaPredicted RBP8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 OR5H8P0DN80 308 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 VDAC1P21796 283 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 TMEM50BP56557 158 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 ACTBP60709 375 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 MMDQ15546 238 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 TBCEQ15813 527 aaPredicted RBP8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 FAM71F2Q6NXP2 309 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF367Q7RTV3 350 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 RNF152Q8N8N0 203 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 FAM3DQ96BQ1 224 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 RBMXL1Q96E39 390 aaKnown RBP8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 RITA1Q96K30 269 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 HSPB9Q9BQS6 159 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 MCRIP2Q9BUT9 160 aaKnown RBP8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 IFI27L2Q9H2X8 130 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 PIPOXQ9P0Z9 390 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 SLC23A1Q9UHI7 598 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF107Q9UII5 783 aaPredicted RBP8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
PDGFRB-203ENST00000517660 TRAV1-2A0A0B4J238 106 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 WI2-2373I1.2A0A1W2PRP0 233 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 A6NHS1 94 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 PDCD5O14737 125 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 LDLRAD4O15165 306 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 NBR2O15453 112 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 ST8SIA5O15466 376 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 IGHG4P01861 327 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 ZBTB25P24278 435 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 CEACAM6P40199 344 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 CDX1P47902 265 aaPredicted RBP8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 VEGFCP49767 419 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 CLDN12P56749 244 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 CFHR3Q02985 330 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 KIR2DS1Q14954 304 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 LIN54Q6MZP7 749 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 NPBQ8NG41 125 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 OR56B1Q8NGI3 324 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 DPF1Q92782 380 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 ARHGAP5-AS1Q96IT6 56 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 KCTD7Q96MP8 289 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 P2RX4Q99571 388 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 CMSS1Q9BQ75 279 aaKnown RBP8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 HDHD3Q9BSH5 251 aaPredicted RBP8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 PECRQ9BY49 303 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 Q9N2K0 584 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 C12orf4Q9NQ89 552 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 RAB22AQ9UL26 194 aa8.28□□□□□ -1.08
PDGFRB-203ENST00000517660 TRDV1A0A1B0GX56 115 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 C3orf84H3BNL1 204 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 CCL24O00175 119 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 HSPA12AO43301 675 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 MRPS14O60783 128 aaKnown RBP8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 HLA-DRB1P01911 266 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 SCTP09683 121 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 CT45A6P0DMU7 189 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 CT45A5P0DMU8 189 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 CT45A7P0DMV0 189 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 SLC2A2P11168 524 aaPredicted RBP8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 CNTFRP26992 372 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 MC5RP33032 325 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 KRTAP10-11P60412 298 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 HLA-DRB3P79483 266 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 EGFEM1PQ0D2K5 195 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 SSX1Q16384 188 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 C5orf64Q2M2E5 130 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 PLAC9Q5JTB6 97 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 HES5Q5TA89 166 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 CD200R1LQ6Q8B3 271 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 EDARADDQ8WWZ3 215 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 PTX4Q96A99 478 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 RAX2Q96IS3 184 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 AGMATQ9BSE5 352 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 PARP12Q9H0J9 701 aaKnown RBP8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 C11orf54Q9H0W9 315 aaPredicted RBP8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 OR51J1Q9H342 316 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 KIAA1456Q9P272 454 aa8.27□□□□□ -1.09
PDGFRB-203ENST00000517660 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 IGHV7-81A0A0B4J1V7 117 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms