RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SRSF7Q16629 238 aaKnown RBP eCLIP19.44■□□□□ 0.73e-10■■■■■ 33.8
PVT1-204ENST00000517525 C10orf99Q6UWK7 81 aa19.44■□□□□ 0.7
PVT1-204ENST00000517525 RASL11BQ9BPW5 248 aa19.44■□□□□ 0.7
PVT1-204ENST00000517525 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.44■□□□□ 0.7
PVT1-204ENST00000517525 CD3GP09693 182 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 HIST1H1DP16402 221 aaKnown RBP19.43■□□□□ 0.7
PVT1-204ENST00000517525 CEACAM6P40199 344 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 SERPINB10P48595 397 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 F2RL1P55085 397 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 KPRPQ5T749 579 aaPredicted RBP19.43■□□□□ 0.7
PVT1-204ENST00000517525 Q6ZS49 121 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 STPG2Q8N412 459 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 OR4A4PQ8NGN8 299 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 KCTD7Q96MP8 289 aa19.43■□□□□ 0.7
PVT1-204ENST00000517525 C11orf54Q9H0W9 315 aaPredicted RBP19.43■□□□□ 0.7
PVT1-204ENST00000517525 IGKV1-6A0A0C4DH72 117 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 ST8SIA5O15466 376 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 SLC35B1P78383 322 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 KIR2DS1Q14954 304 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 SAMD5Q5TGI4 173 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 NOL4LQ96MY1 436 aaPredicted RBP19.42■□□□□ 0.7
PVT1-204ENST00000517525 CENPOQ9BU64 300 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 GON7Q9BXV9 100 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 PARP12Q9H0J9 701 aaKnown RBP19.42■□□□□ 0.7
PVT1-204ENST00000517525 OR51E2Q9H255 320 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 ZFP57Q9NU63 452 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 OR1A1Q9P1Q5 309 aa19.42■□□□□ 0.7
PVT1-204ENST00000517525 A0A0B4J203 849 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 LINC01548A6NM66 108 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 FCGR3AP08637 254 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 SLC2A2P11168 524 aaPredicted RBP19.41■□□□□ 0.7
PVT1-204ENST00000517525 SLC6A1P30531 599 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 SCAND1P57086 179 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 MRPS15P82914 257 aaKnown RBP19.41■□□□□ 0.7
PVT1-204ENST00000517525 NPBQ8NG41 125 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 PHF21AQ96BD5 680 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 CABLES2Q9BTV7 478 aa19.41■□□□□ 0.7
PVT1-204ENST00000517525 OR5H14A6NHG9 310 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 FABP7O15540 132 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 HSPA12AO43301 675 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 IGF1P05019 195 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 CT45A6P0DMU7 189 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 CT45A5P0DMU8 189 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 CT45A7P0DMV0 189 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 SOX6P35712 828 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 ACTBP60709 375 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 PDLIM3Q53GG5 364 aaPredicted RBP19.4■□□□□ 0.7
PVT1-204ENST00000517525 ZNF329Q86UD4 541 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 OR5AN1Q8NGI8 311 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 CHCHD6Q9BRQ6 235 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 PLXNB1O43157 2135 aa19.4■□□□□ 0.7
PVT1-204ENST00000517525 TMEM127O75204 238 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 SCGNO76038 276 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 GNB3P16520 340 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 MC5RP33032 325 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 MMDQ15546 238 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 BEAN1Q3B7T3 259 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 SFXN4Q6P4A7 337 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 RNF152Q8N8N0 203 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 RNF5Q99942 180 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 GAB2Q9UQC2 676 aa19.39■□□□□ 0.69
PVT1-204ENST00000517525 PROP1O75360 226 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 NDUFA3O95167 84 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 CD36P16671 472 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 SDC2P34741 201 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 NEDD8Q15843 81 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 PNLIPRP3Q17RR3 467 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 RPL39P5Q59GN2 51 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 TEX38Q6PEX7 206 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.38■□□□□ 0.69
PVT1-204ENST00000517525 ABHD14BQ96IU4 210 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 RITA1Q96K30 269 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 ATG5Q9H1Y0 275 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 RDH8Q9NYR8 311 aa19.38■□□□□ 0.69
PVT1-204ENST00000517525 TRBV6-7A0A0A0MS04 114 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 A0A1W2PRX2 142 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 H0YJW9 148 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 NBR2O15453 112 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 RRP9O43818 475 aaKnown RBP19.37■□□□□ 0.69
PVT1-204ENST00000517525 RBBP9O75884 186 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 HLA-DRB1P01911 266 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 PF4V1P10720 104 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 DTYMKP23919 212 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 RPL23AP62750 156 aaKnown RBP19.37■□□□□ 0.69
PVT1-204ENST00000517525 CFHR3Q02985 330 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 HSPB9Q9BQS6 159 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 DAPK2Q9UIK4 370 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 LINC00527Q9UJ94 153 aa19.37■□□□□ 0.69
PVT1-204ENST00000517525 SMIM30A4D0T7 59 aa19.36■□□□□ 0.69
PVT1-204ENST00000517525 G3V4G9 280 aa19.36■□□□□ 0.69
PVT1-204ENST00000517525 C5orf64Q2M2E5 130 aa19.36■□□□□ 0.69
PVT1-204ENST00000517525 ZNF107Q9UII5 783 aaPredicted RBP19.36■□□□□ 0.69
PVT1-204ENST00000517525 A0A087WXM4 84 aa19.35■□□□□ 0.69
PVT1-204ENST00000517525 TNFAIP8O95379 198 aa19.35■□□□□ 0.69
PVT1-204ENST00000517525 ELANEP08246 267 aa19.35■□□□□ 0.69
PVT1-204ENST00000517525 GSTP1P09211 210 aaKnown RBP19.35■□□□□ 0.69
PVT1-204ENST00000517525 GSTT2P0CG29 244 aa19.35■□□□□ 0.69
PVT1-204ENST00000517525 GSTT2BP0CG30 244 aa19.35■□□□□ 0.69
PVT1-204ENST00000517525 FOXE3Q13461 319 aa19.35■□□□□ 0.69
PVT1-204ENST00000517525 TIMM50Q3ZCQ8 353 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms