RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TMED3Q9Y3Q3 217 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TMEM56-RWDD3S4R434 201 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LRRK2Q5S007 2527 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 A0A1W2PPH5 198 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CLEC18AA5D8T8 446 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MPTX1A8MV57 137 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 UTP20O75691 2785 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CDS2O95674 445 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CLDN1O95832 211 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SERPINE2P07093 398 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF16P17020 682 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GNB2P62879 340 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 Q3ZCU0 254 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LRRC37A5PQ49AS3 106 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 Q5BKY6 102 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GGNBP1Q5YKI7 109 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 WDR25Q64LD2 544 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 HEPN1Q6WQI6 88 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF66Q6ZN08 573 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF841Q6ZN19 808 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LYZL2Q7Z4W2 148 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SELENOHQ8IZQ5 122 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SLC35G3Q8N808 338 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 DRAXINQ8NBI3 349 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CLEC18CQ8NCF0 446 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LHFPL5Q8TAF8 219 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PPP1R1CQ8WVI7 109 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IGFBPL1Q8WX77 278 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RBPMSQ93062 196 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IL22RA2Q969J5 263 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 HSD17B10Q99714 261 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 AGMATQ9BSE5 352 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ABHD14AQ9BUJ0 271 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PATZ1Q9HBE1 687 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SDHAF2Q9NX18 166 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GSKIPQ9P0R6 139 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 COL12A1Q99715 3063 aa6.29□□□□□ -1.4
SCARNA20.1-201ENST00000516009 AKAP6Q13023 2319 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MALRD1Q5VYJ5 2156 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 FXYD6-FXYD2A0A087WZ82 144 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 HMSDA8MTL9 139 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 F5H0A9 414 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 J3QKU1 62 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SLC31A2O15432 143 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MMP23AO75900 390 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SNAPC5O75971 98 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IGHV3-7P01780 117 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IGHV4-39P01824 125 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PLA2G2AP14555 144 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PSMB6P28072 239 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GNG10P50151 68 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PDLIM4P50479 330 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF134P52741 427 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 DLX6P56179 175 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 EIF4EBP1Q13541 118 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IAH1Q2TAA2 248 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ESCO2Q56NI9 601 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CT45A1Q5HYN5 189 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 BTNL3Q6UXE8 466 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 C9orf62Q8N4C0 152 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF525Q8N782 197 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TCTEX1D1Q8N7M0 179 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF439Q8NDP4 499 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CT45A3Q8NHU0 189 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RNASE11Q8TAA1 199 aaKnown RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GRPEL2Q8TAA5 225 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 THAP6Q8TBB0 222 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TCTEX1D2Q8WW35 142 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LEAP2Q969E1 77 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 C5orf30Q96GV9 206 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SPIN2AQ99865 258 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SPIN2BQ9BPZ2 258 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SSBP3Q9BWW4 388 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IFI27L2Q9H2X8 130 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 NARFLQ9H6Q4 476 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 BARX1Q9HBU1 254 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GAB2Q9UQC2 676 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 HSPB11Q9Y547 144 aa6.28□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TRAV14DV4A0A0A6YYC5 116 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PPIAL4CA0A0B4J2A2 164 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 hCG_1809904A0A1W2PP81 198 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A1W2PPE2 198 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A1W2PPE3 182 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A1W2PR64 198 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A1W2PRV1 198 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C17orf98A8MV24 154 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 M0R1X1 148 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RAB29O14966 203 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ARPC5O15511 151 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 MPC2O95563 127 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RBP4P02753 201 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LIPFP07098 398 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PET100P0DJ07 73 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PPIAL4GP0DN37 164 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RPA2P15927 270 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 VDAC1P21796 283 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms