RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ASCL2Q99929 193 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SPIN2BQ9BPZ2 258 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 FAM173AQ9BQD7 235 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 GINS3Q9BRX5 216 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ST6GALNAC5Q9BVH7 336 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SPACA1Q9HBV2 294 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CRLF2Q9HC73 371 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 GPR173Q9NS66 373 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 OR5AC2Q9NZP5 309 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 B4GALT7Q9UBV7 327 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 AK3Q9UIJ7 227 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 MCTS1Q9ULC4 181 aaKnown RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 STARD10Q9Y365 291 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 STRAPQ9Y3F4 350 aaKnown RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 TMED3Q9Y3Q3 217 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 A0A0C4DFX4 3053 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 NCKAP5O14513 1909 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 IGKV1-27A0A075B6S5 117 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 IGHV3-15A0A0B4J1V0 119 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 KIR2DS1A0A191URI9 304 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 A0A1B0GW64 132 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FAM230AA0A1W2PPH8 454 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 PQLC2LA1A4F0 135 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 C5orf63A6NC05 138 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 BTBD17A6NE02 478 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 MSGN1A6NI15 193 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ZNF850A8MQ14 1090 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ZNF705EA8MWA4 302 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 H7C2Y5 167 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 K7EPK0 472 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 SDCBPO00560 298 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 ST8SIA3O43173 380 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 NDUFS6O75380 124 aaKnown RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 ADAP1O75689 374 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ACTL6AO96019 429 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FOLR2P14207 255 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 GABRR1P24046 479 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 GDF1P27539 372 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 CHRNB4P30926 498 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FCGR2CP31995 323 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 KIR2DS4P43632 304 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 KCNJ3P48549 501 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 LHX2P50458 406 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 PIGPP57054 158 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FGF12P61328 243 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 HERV-K104P61576 105 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 DEFA5Q01523 94 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ZNF92Q03936 586 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 KIR2DS1Q14954 304 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ATXN7L3Q14CW9 347 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 TAF9Q16594 264 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 GUCA2BQ16661 112 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 CEACAM21Q3KPI0 293 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ABCA11PQ4W5N1 156 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 SMUG1Q53HV7 270 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 BEX5Q5H9J7 111 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FAM74A1Q5RGS3 127 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 SHEQ5VZ18 495 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ZNF774Q6NX45 483 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ZNF880Q6PDB4 577 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 YRDCQ86U90 279 aaKnown RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 LFNGQ8NES3 379 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 OR10AD1Q8NGE0 317 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 OR5D18Q8NGL1 313 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 OR4A4PQ8NGN8 299 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 CT55Q8WUE5 264 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 RTN4IP1Q8WWV3 396 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 PSMF1Q92530 271 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 APOBEC3DQ96AK3 386 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 C18orf12Q96KH6 178 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 SGK494Q96LW2 274 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 JSRP1Q96MG2 331 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 TMEM56Q96MV1 263 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 CDX2Q99626 313 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 LITAFQ99732 161 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 MICU1Q9BPX6 476 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 NRIP2Q9BQI9 281 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 SULT4A1Q9BR01 284 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FAAP24Q9BTP7 215 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 C1QTNF6Q9BXI9 259 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 PKIBQ9C010 78 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 SLC25A31Q9H0C2 315 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 TUBA4BQ9H853 241 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ELL3Q9HB65 397 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 TAF9BQ9HBM6 251 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ACKR4Q9NPB9 350 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 FAM212BQ9NTI7 297 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 ZNF701Q9NV72 531 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 UQCC1Q9NVA1 299 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 P4HTMQ9NXG6 502 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 TREM2Q9NZC2 230 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 ST3GAL6Q9Y274 331 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 KLF13Q9Y2Y9 288 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 NOSIPQ9Y314 301 aaKnown RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 MPC1Q9Y5U8 109 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 KLF2Q9Y5W3 355 aaPredicted RBP3.11□□□□□ -1.91
CAST-242ENST00000515063 KPTNQ9Y664 436 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 TMEM56-RWDD3S4R434 201 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 DOCK10Q96BY6 2186 aa3.11□□□□□ -1.91
CAST-242ENST00000515063 CDH23Q9H251 3354 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 1230.6 ms