RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 FBXO7Q9Y3I1 522 aa10.36□□□□□ -0.75
PFDN1-206ENST00000514611 TRAV41A0A0B4J266 112 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 I3L521 148 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 SOCS1O15524 211 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 IGLV1-40P01703 118 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 AQP4P55087 323 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 DCTN2Q13561 401 aaKnown RBP10.35□□□□□ -0.75
PFDN1-206ENST00000514611 IRF3Q14653 427 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 P2RY14Q15391 338 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 ZNF260Q3ZCT1 412 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 FAM71F2Q6NXP2 309 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 NPBQ8NG41 125 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 OR6M1Q8NGM8 313 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 KCNG3Q8TAE7 436 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 CASTOR1Q8WTX7 329 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 UFD1Q92890 307 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 ABHD14BQ96IU4 210 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 UBE2E2Q96LR5 201 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 ALX4Q9H161 411 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-206ENST00000514611 LPAR5Q9H1C0 372 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 FBXL15Q9H469 300 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 PLEKHJ1Q9NW61 149 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 PIPOXQ9P0Z9 390 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 OR1A1Q9P1Q5 309 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 KIAA1456Q9P272 454 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 NKX1-2Q9UD57 310 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-206ENST00000514611 ZMAT5Q9UDW3 170 aaKnown RBP10.35□□□□□ -0.75
PFDN1-206ENST00000514611 STEAP1Q9UHE8 339 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 AK3Q9UIJ7 227 aa10.35□□□□□ -0.75
PFDN1-206ENST00000514611 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
PFDN1-206ENST00000514611 A0A1W2PN81 502 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 H0YJW9 148 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 RAB29O14966 203 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 SOX15O60248 233 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 BPNT1O95861 308 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 CT45A6P0DMU7 189 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 CT45A5P0DMU8 189 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 CT45A7P0DMV0 189 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 SNRPBP14678 240 aaKnown RBP10.34□□□□□ -0.75
PFDN1-206ENST00000514611 CHRNA7P36544 502 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 RPS25P62851 125 aaKnown RBP10.34□□□□□ -0.75
PFDN1-206ENST00000514611 HLA-DRB3P79483 266 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 LIN54Q6MZP7 749 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 TMEM65Q6PI78 240 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 TMEM91Q6ZNR0 172 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 MOB1BQ7L9L4 216 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 WWC2-AS2Q96NR7 200 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.34□□□□□ -0.75
PFDN1-206ENST00000514611 SLC23A1Q9UHI7 598 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 VSIG4Q9Y279 399 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 AK6Q9Y3D8 172 aaKnown RBP10.34□□□□□ -0.75
PFDN1-206ENST00000514611 LRRC42Q9Y546 428 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 A3GALT2U3KPV4 340 aa10.34□□□□□ -0.75
PFDN1-206ENST00000514611 FOXI3A8MTJ6 420 aaPredicted RBP10.33□□□□□ -0.76
PFDN1-206ENST00000514611 OR8U8P0C7N1 319 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 HSMCR30P0CW71 290 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 CD37P11049 281 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 RAB9AP51151 201 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 CLDN12P56749 244 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 ZNF616Q08AN1 781 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 C19orf54Q5BKX5 351 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 MINDY2Q8NBR6 621 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 OR1N2Q8NGR9 330 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 NRG4Q8WWG1 115 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 CHCHD6Q9BRQ6 235 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 AGMATQ9BSE5 352 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 PLGRKTQ9HBL7 147 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 SCN3BQ9NY72 215 aa10.33□□□□□ -0.76
PFDN1-206ENST00000514611 TRBV6-6A0A0A6YYG2 114 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 OR5H14A6NHG9 310 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 FCN1O00602 326 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 SLC17A2O00624 439 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 RRHO14718 337 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 SCTP09683 121 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 ARSBP15848 533 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 CX3CL1P78423 397 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 RUNX1Q01196 453 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 PLGLAQ15195 96 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 DRAXINQ8NBI3 349 aaPredicted RBP10.32□□□□□ -0.76
PFDN1-206ENST00000514611 ABHD5Q8WTS1 349 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 ARHGAP5-AS1Q96IT6 56 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 ASCL2Q99929 193 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 FAM103A1Q9BTL3 118 aaKnown RBP10.32□□□□□ -0.76
PFDN1-206ENST00000514611 URM1Q9BTM9 101 aaKnown RBP10.32□□□□□ -0.76
PFDN1-206ENST00000514611 C11orf54Q9H0W9 315 aaPredicted RBP10.32□□□□□ -0.76
PFDN1-206ENST00000514611 ISYNA1Q9NPH2 558 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 GAB2Q9UQC2 676 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
PFDN1-206ENST00000514611 WASHC3Q9Y3C0 194 aa10.32□□□□□ -0.76
PFDN1-206ENST00000514611 H7C2Y5 167 aa10.31□□□□□ -0.76
PFDN1-206ENST00000514611 HSPA12AO43301 675 aa10.31□□□□□ -0.76
PFDN1-206ENST00000514611 LY86O95711 162 aa10.31□□□□□ -0.76
PFDN1-206ENST00000514611 GSTP1P09211 210 aaKnown RBP10.31□□□□□ -0.76
PFDN1-206ENST00000514611 EGR2P11161 476 aaPredicted RBP10.31□□□□□ -0.76
PFDN1-206ENST00000514611 CEACAM6P40199 344 aa10.31□□□□□ -0.76
PFDN1-206ENST00000514611 VEGFCP49767 419 aa10.31□□□□□ -0.76
PFDN1-206ENST00000514611 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
PFDN1-206ENST00000514611 SLURP1P55000 103 aa10.31□□□□□ -0.76
PFDN1-206ENST00000514611 TMEM50BP56557 158 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms