RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 FAM212BQ9NTI7 297 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 SAA2-SAA4A0A096LPE2 208 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 SLC22A1O15245 554 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 SYT7O43581 403 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 GGCTO75223 188 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 TUSC2O75896 110 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 IFNGP01579 166 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 SAA2P0DJI9 122 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 MRPL19P49406 292 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 RIDAP52758 137 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 EMP1P54849 157 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ATP5G2Q06055 141 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 TSPAN31Q12999 210 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 GNMTQ14749 295 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ZSCAN26Q16670 478 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 C15orf32Q32M92 178 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 PIGYQ3MUY2 71 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 BCDIN3DQ7Z5W3 292 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 ODF3L1Q8IXM7 274 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 DRAXINQ8NBI3 349 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 CNIH3Q8TBE1 160 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 CYYR1Q96J86 154 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 SH3GL1Q99961 368 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 APOL4Q9BPW4 351 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 FAM192AQ9GZU8 254 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR2S2Q9NQN1 319 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 CLEC5AQ9NY25 188 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR52A1Q9UKL2 312 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 MPPED1O15442 326 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR2J3O76001 311 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 IFNA5P01569 189 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 IGKV1-16P04430 117 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 TMEM225BP0DP42 221 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 RPA2P15927 270 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 PPP1CCP36873 323 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 SSBP2P81877 361 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 C6orf141Q5SZD1 244 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 TMEM236Q5W0B7 351 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 CLEC19AQ6UXS0 136 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ZNF679Q8IYX0 411 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ELMOD2Q8IZ81 293 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 C8orf31Q8N9H6 132 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 AQP11Q8NBQ7 271 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR2T33Q8NG76 320 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR52M1Q8NGK5 317 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR1L1Q8NH94 360 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 GHSRQ92847 366 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 MRPS24Q96EL2 167 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 FUZQ9BT04 418 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ABHD14AQ9BUJ0 271 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 IL20Q9NYY1 176 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 EXOSC1Q9Y3B2 195 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 OR7C1O76099 320 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 KDM4BO94953 1096 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 MIFP14174 115 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 ARL3P36405 182 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 CXCR4P61073 352 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 PSG5Q15238 335 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 MICAQ29983 383 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 FAM106AQ4KMX7 169 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 RPL39P5Q59GN2 51 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 LEMD1Q68G75 181 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 CYP2R1Q6VVX0 501 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 SUMF2Q8NBJ7 301 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 OR8J3Q8NGG0 315 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 OR4K15Q8NH41 348 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 ZNRF2Q8NHG8 242 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 TMEM163Q8TC26 289 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 ADAT3Q96EY9 351 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 DPCDQ9BVM2 203 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 KRTAP1-5Q9BYS1 174 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 ROPN1BQ9BZX4 212 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 ROPN1Q9HAT0 212 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 CMTM6Q9NX76 183 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 TRAV25A0A0B4J276 109 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 TMEM30CPA0ZSE6 113 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 OR4C46A6NHA9 309 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 DHRS7CA6NNS2 312 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 AIPO00170 330 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 NME4O00746 187 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 TSPAN4O14817 238 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 SPINT2O43291 252 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 GASTP01350 101 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 HBZP02008 142 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 RCC1P18754 421 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 NPY1RP25929 384 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 IFNGR2P38484 337 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 HTD2P86397 168 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 MORN2Q502X0 79 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 SLC25A30Q5SVS4 291 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 ATAD3CQ5T2N8 411 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 SYT6Q5T7P8 510 aaPredicted RBP2.3□□□□□ -2.04
CHD1-211ENST00000514344 RPL13AP3Q6NVV1 102 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 TMEM88Q6PEY1 159 aa2.3□□□□□ -2.04
CHD1-211ENST00000514344 C19orf35Q6ZS72 473 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms