RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 C7orf66A4D0T2 115 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 HLA-DRB3P79483 266 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 C20orf204Q6ZNR8 217 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 TMEM45BQ96B21 275 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 OR2W1Q9Y3N9 320 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 TRAV40A0A0B4J280 105 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 APOMO95445 188 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 ETHE1O95571 254 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 ALPLP05186 524 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 ZNF66Q6ZN08 573 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 TMEM129A0AVI4 362 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 M0R381 172 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 GEMIN2O14893 280 aaKnown RBP7.73□□□□□ -1.17
VCAN-208ENST00000512590 NDUFS5O43920 106 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 HPRT1P00492 218 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 REG1AP05451 166 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 GPX4P36969 197 aaPredicted RBP7.73□□□□□ -1.17
VCAN-208ENST00000512590 ERASQ7Z444 233 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 CHST5Q9GZS9 411 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 F5H768 121 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 PTP4A3O75365 173 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 CTSDP07339 412 aaPredicted RBP7.72□□□□□ -1.17
VCAN-208ENST00000512590 MGAT2Q10469 447 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 CYS1Q717R9 158 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 ZIC4Q8N9L1 334 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 C15orf53Q8NAA6 179 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 OR11H4Q8NGC9 324 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 OTOSQ8NHW6 89 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 SPSB4Q96A44 273 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 TRDV1A0A1B0GX56 115 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 G3V2L1 256 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 TNFRSF6BO95407 300 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 CXorf1O96002 111 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 THBDP07204 575 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 SSTR5P35346 364 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 UBE2BP63146 152 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 KLHL30-AS1Q8NEE0 82 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 OR10G8Q8NGN5 311 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 ATOH8Q96SQ7 321 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 TRAV20A0A0B4J274 112 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 B4DEV8 164 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 ZG16O60844 167 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 EFEMP2O95967 443 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 SELLP14151 372 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 HOXB3P14651 431 aaPredicted RBP7.72□□□□□ -1.17
VCAN-208ENST00000512590 SMN1Q16637 294 aaKnown RBP7.72□□□□□ -1.17
VCAN-208ENST00000512590 ACP7Q6ZNF0 438 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 WDFY1Q8IWB7 410 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 ARPC1AQ92747 370 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 C1QTNF4Q9BXJ3 329 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 ZNF253O75346 499 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 HBZP02008 142 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 STAG3L3P0CL85 134 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 DAD1P61803 113 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 TMEM186Q96B77 213 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 STARD10Q9Y365 291 aa7.72□□□□□ -1.17
VCAN-208ENST00000512590 CA2P00918 260 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 WNT2P09544 360 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 LMO1P25800 156 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 LINC00158P58513 81 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 MBNL2Q5VZF2 373 aaKnown RBP7.71□□□□□ -1.17
VCAN-208ENST00000512590 PPP1R32Q7Z5V6 425 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 RTN4RL2Q86UN3 420 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 TPRX1Q8N7U7 411 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 LMO3Q8TAP4 145 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 DPM3Q9P2X0 92 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 CHST2Q9Y4C5 530 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 CSRP1P21291 193 aaKnown RBP7.71□□□□□ -1.17
VCAN-208ENST00000512590 GPR183P32249 361 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 MPV17P39210 176 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 ZP4Q12836 540 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 COX19Q49B96 90 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 TMEM255AQ5JRV8 349 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 MS4A3Q96HJ5 214 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 KCNS1Q96KK3 526 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 WDFY2Q96P53 400 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 ABHD1Q96SE0 405 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 PILRBQ9UKJ0 227 aa7.71□□□□□ -1.17
VCAN-208ENST00000512590 URB1O60287 2271 aaKnown RBP7.71□□□□□ -1.17
VCAN-208ENST00000512590 SDK1Q7Z5N4 2213 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.71□□□□□ -1.18
VCAN-208ENST00000512590 C11orf94C9JXX5 98 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 FCMRO60667 390 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 MMP9P14780 707 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 DLEU7Q6UYE1 221 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 FDCSPQ8NFU4 85 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 SP7Q8TDD2 431 aaPredicted RBP7.71□□□□□ -1.18
VCAN-208ENST00000512590 FRRS1LQ9P0K9 344 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 ZNF561-AS1K7EIQ3 104 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 PLPP3O14495 311 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 CRHP06850 196 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 CTSBP07858 339 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 HOXA5P20719 270 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 BSPH1Q075Z2 132 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 MDS2Q8NDY4 140 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 FAM216AQ8WUB2 273 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 MMP26Q9NRE1 261 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 CYB5R1Q9UHQ9 305 aa7.71□□□□□ -1.18
VCAN-208ENST00000512590 SNED1Q8TER0 1413 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms