RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
DDX41-214ENST00000512334 ABHD14BQ96IU4 210 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 S1PR3Q99500 378 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 WNT10AQ9GZT5 417 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 C11orf54Q9H0W9 315 aaPredicted RBP12.65□□□□□ -0.38
DDX41-214ENST00000512334 TMEM235A6NFC5 223 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 SMIM18P0DKX4 95 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 CD28P10747 220 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 RPS19P39019 145 aaKnown RBP12.64□□□□□ -0.39
DDX41-214ENST00000512334 SERPINB10P48595 397 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 GNG2P59768 71 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 IGSF11Q5DX21 431 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 HACD4Q5VWC8 232 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 Q8N6K4 173 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 OR10J5Q8NHC4 309 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 NUDCD2Q8WVJ2 157 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 NABP2Q9BQ15 211 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX41-214ENST00000512334 RDH8Q9NYR8 311 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
DDX41-214ENST00000512334 FBN3Q75N90 2809 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 TMEM127O75204 238 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 GSTP1P09211 210 aaKnown RBP12.63□□□□□ -0.39
DDX41-214ENST00000512334 CSF1P09603 554 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 DTYMKP23919 212 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 NCS1P62166 190 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 ZNF260Q3ZCT1 412 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 OR5AU1Q8NGC0 362 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 OR8H1Q8NGG4 311 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 OR13F1Q8NGS4 319 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 SLC25A38Q96DW6 304 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 ST6GALNAC5Q9BVH7 336 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 ZNF221Q9UK13 617 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 SPATA2Q9UM82 520 aa12.63□□□□□ -0.39
DDX41-214ENST00000512334 TRAV18A0A075B6X5 111 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 TSPAN15O95858 294 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 GPR12P47775 334 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 VBP1P61758 197 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 PITPNAQ00169 270 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 MMDQ15546 238 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 NSUN5P1Q3KNT7 163 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 Q8N9W7 124 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
DDX41-214ENST00000512334 RASL11BQ9BPW5 248 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 AGMATQ9BSE5 352 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 MRPS26Q9BYN8 205 aaKnown RBP12.62□□□□□ -0.39
DDX41-214ENST00000512334 MMP27Q9H306 513 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 DIABLOQ9NR28 239 aa12.62□□□□□ -0.39
DDX41-214ENST00000512334 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
DDX41-214ENST00000512334 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
DDX41-214ENST00000512334 F2RL1P55085 397 aa12.61□□□□□ -0.39
DDX41-214ENST00000512334 SRSF7Q16629 238 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX41-214ENST00000512334 PNLIPRP3Q17RR3 467 aa12.61□□□□□ -0.39
DDX41-214ENST00000512334 GLDNQ6ZMI3 551 aaPredicted RBP12.61□□□□□ -0.39
DDX41-214ENST00000512334 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
DDX41-214ENST00000512334 CITED2Q99967 270 aaPredicted RBP12.61□□□□□ -0.39
DDX41-214ENST00000512334 PLSCR3Q9NRY6 295 aa12.61□□□□□ -0.39
DDX41-214ENST00000512334 LIN7CQ9NUP9 197 aaKnown RBP12.61□□□□□ -0.39
DDX41-214ENST00000512334 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 A6NJ64 397 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 OR8U9P0C7N5 309 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 CT45A6P0DMU7 189 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 CT45A5P0DMU8 189 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 CT45A7P0DMV0 189 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 ACTBP60709 375 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 FAM131AQ6UXB0 335 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 Q6ZS49 121 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 FOXRED2Q8IWF2 684 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 DRAXINQ8NBI3 349 aaPredicted RBP12.6□□□□□ -0.39
DDX41-214ENST00000512334 OR4X2Q8NGF9 303 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 OR8U1Q8NH10 309 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 SLC25A46Q96AG3 418 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
DDX41-214ENST00000512334 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 ABCG5Q9H222 651 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 DCSTAMPQ9H295 470 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 LINC00527Q9UJ94 153 aa12.6□□□□□ -0.39
DDX41-214ENST00000512334 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 H7C2Y5 167 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 DIRAS3O95661 229 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 IGHG2P01859 326 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 CNTFRP26992 372 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 UBE2NLQ5JXB2 153 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 GPR107Q5VW38 600 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 NDUFA11Q86Y39 141 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 SAMD12Q8N8I0 201 aa12.59□□□□□ -0.39
DDX41-214ENST00000512334 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
DDX41-214ENST00000512334 NAA50Q9GZZ1 169 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms