RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LAP3P28838 519 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 BLVRBP30043 206 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 ACVR1BP36896 505 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 PAX9P55771 341 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 SCAND1P57086 179 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TPPP2P59282 170 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 SEC61GP60059 68 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 SUMO2P61956 95 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 ADIGQ0VDE8 80 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 KLRB1Q12918 225 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 PMS2P11Q13670 270 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 LBHQ53QV2 105 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM128Q5BJH2 165 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 DCAF10Q5QP82 559 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 SFRP4Q6FHJ7 346 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF774Q6NX45 483 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM144Q7Z5S9 345 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 ANGPTL5Q86XS5 388 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR10P1Q8NGE3 313 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR1L4Q8NGR5 311 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR2T35Q8NGX2 323 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 MRPL30Q8TCC3 161 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 RMI2Q96E14 147 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 CXorf58Q96LI9 332 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 STACQ99469 402 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 SEC11CQ9BY50 192 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM126AQ9H061 195 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 MS4A6AQ9H2W1 248 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 SPANXA1Q9NS26 97 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 LANCL2Q9NS86 450 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM38BQ9NVV0 291 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TXNL4BQ9NX01 149 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM120CQ9NX05 1096 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 WSB2Q9NYS7 404 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 MTCH1Q9NZJ7 389 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 MRPL15Q9P015 296 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 MIOXQ9UGB7 285 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 OPN4Q9UHM6 478 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 AK3Q9UIJ7 227 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 PSG11Q9UQ72 335 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMED7Q9Y3B3 224 aa1.42□□□□□ -2.18
TRAPPC13-211ENST00000512009 NPIPB15A6NHN6 443 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 GRXCR1A8MXD5 290 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 SMLR1H3BR10 107 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 K7ESM1 405 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 UBE2CO00762 179 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PLPP1O14494 284 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ISLRO14498 428 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 MLNRO43193 412 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 RBFOX2O43251 390 aaKnown RBP eCLIP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 NUDT21O43809 227 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 LILRA1O75019 489 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 NAPSAO96009 420 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 GBAP04062 536 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 IGHV4-34P06331 123 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 LINC00869P0C866 280 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 CPMP14384 443 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 GABRA1P14867 456 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 CPN1P15169 458 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 POLR2CP19387 275 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PSMB6P28072 239 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ASIPP42127 132 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PTGFRP43088 359 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 GALR1P47211 349 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 TDGF1P3P51864 188 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 MTPNP58546 118 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 UBE2IP63279 158 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM3AP98173 230 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF90Q03938 601 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ELOBQ15370 118 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC5A12Q1EHB4 618 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 SMIM21Q3B7S5 101 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM78AQ5JUQ0 283 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PLEKHS1Q5SXH7 462 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF585AQ6P3V2 769 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF620Q6ZNG0 422 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 H2BFWTQ7Z2G1 175 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 MDGA2Q7Z553 956 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 FJX1Q86VR8 437 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 HOGA1Q86XE5 327 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 C10orf126Q8N4M7 172 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR2C3Q8N628 320 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 CSNK1A1LQ8N752 337 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM217Q8N7C4 229 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 CDRT4Q8N9R6 151 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF680Q8NEM1 530 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR1L8Q8NGR8 309 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR52I2Q8NH67 350 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 RAB40AQ8WXH6 277 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 RND1Q92730 232 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PLD4Q96BZ4 506 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 POM121L2Q96KW2 1035 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 MGLLQ99685 303 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 ABHD6Q9BV23 337 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 LRRC61Q9BV99 259 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 PKIBQ9C010 78 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 QRSL1Q9H0R6 528 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 GLIPR2Q9H4G4 154 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 OCIAD1Q9NX40 245 aa1.41□□□□□ -2.18
TRAPPC13-211ENST00000512009 SMPD3Q9NY59 655 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms