RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 Q8N6K4 173 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 OR4A4PQ8NGN8 299 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 NABP2Q9BQ15 211 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 RDH8Q9NYR8 311 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 NBEAL1Q6ZS30 2694 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 TRAV18A0A075B6X5 111 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 F2RL1P55085 397 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 VBP1P61758 197 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 KIR2DS1Q14954 304 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 HACD4Q5VWC8 232 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 GLDNQ6ZMI3 551 aaPredicted RBP11.09□□□□□ -0.63
DDX41-212ENST00000511040 RITA1Q96K30 269 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 ZNF251Q9BRH9 671 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 ST6GALNAC5Q9BVH7 336 aa11.09□□□□□ -0.63
DDX41-212ENST00000511040 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
DDX41-212ENST00000511040 TET2Q6N021 2002 aaPredicted RBP11.09□□□□□ -0.63
DDX41-212ENST00000511040 RAB29O14966 203 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 SSX5O60225 188 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 GSTP1P09211 210 aaKnown RBP11.08□□□□□ -0.64
DDX41-212ENST00000511040 GNG2P59768 71 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 ZNF260Q3ZCT1 412 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
DDX41-212ENST00000511040 Q8N9W7 124 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 DRAXINQ8NBI3 349 aaPredicted RBP11.08□□□□□ -0.64
DDX41-212ENST00000511040 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 OR10J5Q8NHC4 309 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 WIPF2Q8TF74 440 aaPredicted RBP11.08□□□□□ -0.64
DDX41-212ENST00000511040 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 PHF21AQ96BD5 680 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 CITED2Q99967 270 aaPredicted RBP11.08□□□□□ -0.64
DDX41-212ENST00000511040 AGMATQ9BSE5 352 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 MRPS26Q9BYN8 205 aaKnown RBP11.08□□□□□ -0.64
DDX41-212ENST00000511040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX41-212ENST00000511040 PLSCR3Q9NRY6 295 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 PIPOXQ9P0Z9 390 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 LINC00527Q9UJ94 153 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 TRRAPQ9Y4A5 3859 aa11.08□□□□□ -0.64
DDX41-212ENST00000511040 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 ITGB1BP1O14713 200 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 FGF16O43320 207 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 SCGNO76038 276 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CSF1P09603 554 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CT45A6P0DMU7 189 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CT45A5P0DMU8 189 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CT45A7P0DMV0 189 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 PTHLHP12272 177 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 DTYMKP23919 212 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CNTFRP26992 372 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 GPR12P47775 334 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 SCAND1P57086 179 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 LINC00205P59089 165 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 C2orf68Q2NKX9 166 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 FAM131AQ6UXB0 335 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CROCCP3Q8IVE0 287 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 FAM110DQ8TAY7 271 aaPredicted RBP11.07□□□□□ -0.64
DDX41-212ENST00000511040 NOL4LQ96MY1 436 aaPredicted RBP11.07□□□□□ -0.64
DDX41-212ENST00000511040 S1PR3Q99500 378 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 GINS4Q9BRT9 223 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 CABLES2Q9BTV7 478 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 ZNF221Q9UK13 617 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 SPATA2Q9UM82 520 aa11.07□□□□□ -0.64
DDX41-212ENST00000511040 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 A0A1W2PRX2 142 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 J3QRK9 145 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 FCER2P06734 321 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 OR8U9P0C7N5 309 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 ACTBP60709 375 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 PNLIPRP3Q17RR3 467 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 GPR107Q5VW38 600 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 FAM71F2Q6NXP2 309 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 SAMD12Q8N8I0 201 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 OR8U1Q8NH10 309 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 SLC25A46Q96AG3 418 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 RASL11BQ9BPW5 248 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 DIABLOQ9NR28 239 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 CMYA5Q8N3K9 4069 aa11.06□□□□□ -0.64
DDX41-212ENST00000511040 M0R1X1 148 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 PROP1O75360 226 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 PITPNAQ00169 270 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 MMDQ15546 238 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 SRSF7Q16629 238 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX41-212ENST00000511040 TCTEX1D4Q5JR98 221 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 Q6ZS49 121 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 OR2D2Q9H210 308 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 AUNIPQ9H7T9 357 aa11.05□□□□□ -0.64
DDX41-212ENST00000511040 TCRBV4S1A1TA0A5B7 111 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 PSMB11A5LHX3 300 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 ADARB2-AS1A8MUL3 147 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 H0YJW9 148 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms