RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 OR7C1O76099 320 aaPredicted RBP8.1□□□□□ -1.11
USP53-207ENST00000510852 HILS1P60008 231 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 CLINT1Q14677 625 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 LINC00114Q6XXX2 140 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 ZNF730Q6ZMV8 503 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 CHMP1BQ7LBR1 199 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 OR8I2Q8N0Y5 310 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 ZNF485Q8NCK3 441 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 OR4K5Q8NGD3 323 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 OR1L8Q8NGR8 309 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 ST6GAL2Q96JF0 529 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 SMIM8Q96KF7 97 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 OXGR1Q96P68 337 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 BOKQ9UMX3 212 aaPredicted RBP8.1□□□□□ -1.11
USP53-207ENST00000510852 ZZEF1O43149 2961 aa8.1□□□□□ -1.11
USP53-207ENST00000510852 FAM157AC9JC47 383 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 ETV2O00321 342 aaPredicted RBP8.09□□□□□ -1.11
USP53-207ENST00000510852 CRYBA1P05813 215 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 RFPL3SP0C7P2 107 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 DAPP51397 102 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 POLR2HP52434 150 aaKnown RBP8.09□□□□□ -1.11
USP53-207ENST00000510852 DSCR4P56555 118 aaPredicted RBP8.09□□□□□ -1.11
USP53-207ENST00000510852 RAB40BQ12829 278 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 FOXF1Q12946 379 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 COL5A1-AS1Q5SY13 56 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 IGFL3Q6UXB1 125 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 SLC25A48Q6ZT89 311 aaKnown RBP8.09□□□□□ -1.11
USP53-207ENST00000510852 PACRGLQ8N7B6 248 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 TMEM178AQ8NBL3 297 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 DIRAS2Q96HU8 199 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 RNF167Q9H6Y7 350 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
USP53-207ENST00000510852 PTPRQQ9UMZ3 2332 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 TRAV30A0A087WSZ9 112 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 TMED7-TICAM2A0A0A6YYA0 188 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 TRAV17A0A0B4J275 112 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 ARRDC5A6NEK1 342 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 A8MXK9 166 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 K7EM74 188 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 SH2D1BO14796 132 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 TSPAN15O95858 294 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 ALPLP05186 524 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 GZMKP49863 264 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 RPS4XP62701 263 aaKnown RBP8.09□□□□□ -1.11
USP53-207ENST00000510852 PLP2Q04941 152 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 SMAGPQ0VAQ4 97 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 C5orf24Q7Z6I8 188 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 LINC00471Q8N535 108 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 PFN4Q8NHR9 129 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 NDFIP1Q9BT67 221 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 Q9H521 79 aa8.09□□□□□ -1.11
USP53-207ENST00000510852 SPENQ96T58 3664 aaKnown RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 EML6Q6ZMW3 1958 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 IGKV1D-42A0A075B6H8 117 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 HTR1DP28221 377 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 S100A2P29034 98 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 MDH2P40926 338 aaKnown RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 KLF5Q13887 457 aaPredicted RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 ZNF672Q499Z4 452 aaPredicted RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 HIST2H3PS2Q5TEC6 136 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 TTTY12Q9BZ98 90 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 RNF122Q9H9V4 155 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 MEPEQ9NQ76 525 aaPredicted RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 MED31Q9Y3C7 131 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 ATMQ13315 3056 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 ZNF587BE7ETH6 402 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 TAAR5O14804 337 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 SYNGR1O43759 233 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 HOXD3P31249 432 aaPredicted RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 AQP4P55087 323 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 TAS2R30P59541 319 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 PLGLB1Q02325 96 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 KDM4DQ6B0I6 523 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 IZUMO2Q6UXV1 221 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 ZFP62Q8NB50 900 aaPredicted RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 OR1N2Q8NGR9 330 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 RNF183Q96D59 192 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 WBP1Q96G27 269 aa8.08□□□□□ -1.12
USP53-207ENST00000510852 RPL36Q9Y3U8 105 aaKnown RBP8.08□□□□□ -1.12
USP53-207ENST00000510852 BOD1L1Q8NFC6 3051 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 PCNX3Q9H6A9 2034 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 FAM166BA8MTA8 275 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 OVOL3O00110 214 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 RBFOX2O43251 390 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP53-207ENST00000510852 IL18BPO95998 194 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 IFNA7P01567 189 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 PPIFP30405 207 aaKnown RBP8.07□□□□□ -1.12
USP53-207ENST00000510852 RFX2P48378 723 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 P2RY6Q15077 328 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 OTPQ5XKR4 325 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 LINC00299Q6ZSB3 139 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 RBMXL3Q8N7X1 1067 aaKnown RBP8.07□□□□□ -1.12
USP53-207ENST00000510852 DUSP18Q8NEJ0 188 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 FAAP24Q9BTP7 215 aa8.07□□□□□ -1.12
USP53-207ENST00000510852 PRORYQ9H606 182 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms