RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CBX1P83916 185 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 SMIM21Q3B7S5 101 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 CEACAM21Q3KPI0 293 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 PAGE3Q5JUK9 113 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 TRMT10CQ7L0Y3 403 aaKnown RBP4.28□□□□□ -1.72
USP53-206ENST00000510737 KRT74Q7RTS7 529 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 OR8H2Q8N162 312 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 MREGQ8N565 214 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 MINDY2Q8NBR6 621 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 RPEQ96AT9 228 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 MOB3AQ96BX8 217 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 FLYWCH2Q96CP2 140 aaKnown RBP4.28□□□□□ -1.72
USP53-206ENST00000510737 SLAMF6Q96DU3 332 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 NMNAT3Q96T66 252 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 S1PR3Q99500 378 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 COPS4Q9BT78 406 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 A0A087WUU8 490 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 TVP23AA6NH52 213 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 IGLL5B9A064 214 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 IGHV3-11P01762 117 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 IGHV3-7P01780 117 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 IFNA4P05014 189 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 VIMP08670 466 aaKnown RBP4.27□□□□□ -1.73
USP53-206ENST00000510737 OR5H8P0DN80 308 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 PTMSP20962 102 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 BMI1P35226 326 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 SOX6P35712 828 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 CX3CR1P49238 355 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 RAB40BQ12829 278 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 KLF5Q13887 457 aaPredicted RBP4.27□□□□□ -1.73
USP53-206ENST00000510737 LGALS9BQ3B8N2 356 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 LCN12Q6JVE5 192 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 DNM1P34Q6PK57 102 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 DCXRQ7Z4W1 244 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 Q8N402 240 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 OR5A2Q8NGI9 324 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 OR9G4Q8NGQ1 327 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 CORO2AQ92828 525 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 NEDD4LQ96PU5 975 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 GPX7Q96SL4 187 aaPredicted RBP4.27□□□□□ -1.73
USP53-206ENST00000510737 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 TXLNGYQ9BZA5 131 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 POLR2J2Q9GZM3 115 aaKnown RBP4.27□□□□□ -1.73
USP53-206ENST00000510737 NDEL1Q9GZM8 345 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 CHST6Q9GZX3 395 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 POLR2J3Q9H1A7 115 aaKnown RBP4.27□□□□□ -1.73
USP53-206ENST00000510737 FN3KQ9H479 309 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 ABCB9Q9NP78 766 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 RPRD1BQ9NQG5 326 aaKnown RBP4.27□□□□□ -1.73
USP53-206ENST00000510737 GPR173Q9NS66 373 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 SIGLEC7Q9Y286 467 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 COMMD3-BMI1R4GMX3 469 aa4.27□□□□□ -1.73
USP53-206ENST00000510737 A0A087WZ39 114 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 SMIM23A6NLE4 172 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 EVPLLA8MZ36 301 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 ZNF736B4DX44 427 aaPredicted RBP4.26□□□□□ -1.73
USP53-206ENST00000510737 TXNL1O43396 289 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 NDUFB2O95178 105 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 IDO1P14902 403 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 PPIBP23284 216 aaKnown RBP4.26□□□□□ -1.73
USP53-206ENST00000510737 CFL1P23528 166 aaKnown RBP4.26□□□□□ -1.73
USP53-206ENST00000510737 NPBWR2P48146 333 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 RAB7AP51149 207 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 ZNF121P58317 390 aaPredicted RBP4.26□□□□□ -1.73
USP53-206ENST00000510737 SRPXP78539 464 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 ST3GAL3Q11203 375 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 GRK1Q15835 563 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 SNCBQ16143 134 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 DLEU7Q6UYE1 221 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 DPY19L2P2Q6ZN68 376 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 TRAPPC6BQ86SZ2 158 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 FUNDC1Q8IVP5 155 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 OR8H3Q8N146 312 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 FTMTQ8N4E7 242 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 OR2T10Q8NGZ9 312 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 OR9G1Q8NH87 305 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 SLC26A7Q8TE54 656 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 LEAP2Q969E1 77 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 GGTLC1Q9BX51 225 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 SLC2A8Q9NY64 477 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 SLC7A11Q9UPY5 501 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 TP53TG1Q9Y2A0 90 aa4.26□□□□□ -1.73
USP53-206ENST00000510737 LOC102724200A0A096LPH7 203 aaPredicted RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 TRAV41A0A0B4J266 112 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 IGHV1-3A0A0C4DH29 117 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 H0Y9J4 135 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 DLGAP1O14490 977 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 FFAR1O14842 300 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 ARPC1BO15143 372 aaKnown RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 HIST1H1CP16403 213 aaKnown RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 MGMTP16455 207 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 CTRB1P17538 263 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 NFYBP25208 207 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 ERP29P30040 261 aaKnown RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 PYCR1P32322 319 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 YAP1P46937 504 aaKnown RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 HAAOP46952 286 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 REG1BP48304 166 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 SLC1A6P48664 564 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms