RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-215	ENST00000510241	TRIOBP	Q9H2D6	2365 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	ATM	Q13315	3056 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241		F2Z2F3	143 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241		H0Y980	276 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	TRAPPC2L	H3BP13	241 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	IGHV3-13	P01766	116 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	IGHV3-7	P01780	117 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	PCOLCE	Q15113	449 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	LRRC75B	Q2VPJ9	315 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	MCEMP1	Q8IX19	187 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	OR1L1	Q8NH94	360 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	OR51I2	Q9H344	312 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	PLSCR2	Q9NRY7	297 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	PAM16	Q9Y3D7	125 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	OR2W1	Q9Y3N9	320 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241	ROS1	P08922	2347 aa		13.57	□□□□□ -0.24
APBB3-215	ENST00000510241		B4E171	279 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	TSPAN7	P41732	249 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	ATP5G3	P48201	142 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	C3AR1	Q16581	482 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	OR2T10	Q8NGZ9	312 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	IFI44	Q8TCB0	444 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	C10orf35	Q96D05	121 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	FKBP11	Q9NYL4	201 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	LOC102725191	A0A1B0GVB3	256 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	TMEM41B	Q5BJD5	291 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	TBX15	Q96SF7	602 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	GPR35	Q9HC97	309 aa		13.56	□□□□□ -0.24
APBB3-215	ENST00000510241	CAD	P27708	2225 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	KBTBD11	O94819	623 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	PAX1	P15863	534 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	IL3RA	P26951	378 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	ARF1	P84077	181 aa	Known RBP	13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	OR8B8	Q15620	311 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	FFAR4	Q5NUL3	377 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	FOXL2NB	Q6ZUU3	175 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	RABEPK	Q7Z6M1	372 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	OR10G4	Q8NGN3	311 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	OR10G9	Q8NGN4	311 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	OR10G7	Q8NGN6	311 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	MBD3L1	Q8WWY6	194 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	PATZ1	Q9HBE1	687 aa	Known RBP	13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	PRDM6	Q9NQX0	595 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	TRAV1-1	A0A0B4J248	108 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	ZNF716	A6NP11	495 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	IGFBP4	P22692	258 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	CA6	P23280	308 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	DSCR4	P56555	118 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	FOXO1	Q12778	655 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241		Q6ZSR3	168 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	CYP2G1P	Q6ZSU1	146 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	MRPL21	Q7Z2W9	205 aa	Known RBP	13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	TMEM68	Q96MH6	324 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	TCFL5	Q9UL49	500 aa		13.55	□□□□□ -0.24
APBB3-215	ENST00000510241	NDUFB4	O95168	129 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	UMOD	P07911	640 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	CELA3A	P09093	270 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	CST2	P09228	141 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	LTC4S	Q16873	150 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	CXorf67	Q86X51	503 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	TPRX1	Q8N7U7	411 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	TMEM242	Q9NWH2	141 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	CEP250	Q9BV73	2442 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	PINLYP	A6NC86	204 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	ZG16	O60844	167 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	HRAS	P01112	189 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	PDGFB	P01127	241 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	IRF2	P14316	349 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	CDKN1A	P38936	164 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	PSMB3	P49720	205 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	FGF12	P61328	243 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	TOMM20L	Q6UXN7	152 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	MKX	Q8IYA7	352 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	FGFRL1	Q8N441	504 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	SNIP1	Q8TAD8	396 aa	Known RBP	13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	RAB40C	Q96S21	281 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	TRAPPC1	Q9Y5R8	145 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	VAMP5	O95183	116 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	BTF3	P20290	206 aa	Known RBP	13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	RAC1	P63000	192 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	GGN	Q86UU5	652 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	RPS19BP1	Q86WX3	136 aa	Known RBP	13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	SMRP1	Q8NCR6	262 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	TMEM18	Q96B42	140 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	MS4A10	Q96PG2	267 aa		13.54	□□□□□ -0.24
APBB3-215	ENST00000510241	DEFB108A	A8MXU0	73 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	CEACAM6	P40199	344 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	EDDM3B	P56851	147 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	WDR74	Q6RFH5	385 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-215	ENST00000510241		Q6ZVH6	145 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	TMEM170A	Q8WVE7	144 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	DIRC2	Q96SL1	478 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	FAM103A1	Q9BTL3	118 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	OR6C3	Q9NZP0	311 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	HEATR1	Q9H583	2144 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	ABCA1	O95477	2261 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	CACNA1G	O43497	2377 aa		13.53	□□□□□ -0.24
APBB3-215	ENST00000510241	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	3e-6	■■■■□ 22.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms