RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TNFRSF14Q92956 283 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 SPSB4Q96A44 273 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 EEF1AKMT3Q96AZ1 226 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 RNF2Q99496 336 aa4.32□□□□□ -1.72
PHF3-210ENST00000509876 ZNF106Q9H2Y7 1883 aaKnown RBP4.32□□□□□ -1.72
PHF3-210ENST00000509876 A0A1B0GTI1 187 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SSX5O60225 188 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 IGKV1D-33P01593 117 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 IGKV1-33P01594 117 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 COL8A2P25067 703 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 RPL12P30050 165 aaKnown RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 SSTR5P35346 364 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 LYZP61626 148 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SPINK9Q5DT21 86 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 IGSF11Q5DX21 431 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 WDR25Q64LD2 544 aaPredicted RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 LAMTOR1Q6IAA8 161 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SLC35E3Q7Z769 313 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 OR2G3Q8NGZ4 309 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SLC25A33Q9BSK2 321 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 NMES1Q9C002 83 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 UQCC1Q9NVA1 299 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 ZMAT5Q9UDW3 170 aaKnown RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 FLVCR2Q9UPI3 526 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 KPTNQ9Y664 436 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 CEP192Q8TEP8 1941 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 A0A1W2PS18 150 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 NPIPB11E5RHQ5 1161 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 FBXO24O75426 580 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SIX6O95475 246 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 OR10J4P0C629 311 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 CT45A10P0DMU9 189 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 CD99P14209 185 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 S100A11P31949 105 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 GLDNQ6ZMI3 551 aaPredicted RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 LEAP2Q969E1 77 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 CITED4Q96RK1 184 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SLC2A9Q9NRM0 540 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 NCOR1O75376 2440 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 C9orf170A2RU37 121 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SRRM5B3KS81 715 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 PSMB3P49720 205 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 PEA15Q15121 130 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 LIAT1Q6ZQX7 453 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 HSD17B13Q7Z5P4 300 aaPredicted RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 HSD17B11Q8NBQ5 300 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 FAM213BQ8TBF2 198 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 ABHD1Q96SE0 405 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 A0A0G2JK05 382 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 A0A1B0GU03 582 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 UBE2L5PA0A1B0GUS4 154 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 A0A1W2PP11 408 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 TMEM14DPA8MWL7 114 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 H0Y980 276 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 OR2A4O95047 310 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 HGFACQ04756 655 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SLC38A11Q08AI6 406 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 FCN2Q15485 313 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 DTD1Q8TEA8 209 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 FAM216AQ8WUB2 273 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 OR2A7Q96R45 310 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 POMT1Q9Y6A1 747 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SCN8AQ9UQD0 1980 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 COL5A1P20908 1838 aaPredicted RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 A0A0G2JLM5 398 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 OR7C2O60412 319 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 JTBO76095 146 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 DEFA5Q01523 94 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 ZNF260Q3ZCT1 412 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 VAX1Q5SQQ9 334 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 MINOS1Q5TGZ0 78 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 C12orf54Q6X4T0 127 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 GTF3AQ92664 365 aaKnown RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 REG4Q9BYZ8 158 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 MINOS1-NBL1R4GNA1 71 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 LRRK1Q38SD2 2015 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 A0A0A6YYJ9 748 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SLC25A17O43808 307 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 TPPP2P59282 170 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 PPP1R1AQ13522 171 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 FXYD3Q14802 87 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 ASPHD2Q6ICH7 369 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 OR13A1Q8NGR1 328 aa4.31□□□□□ -1.72
PHF3-210ENST00000509876 SLIRPQ9GZT3 109 aaKnown RBP4.31□□□□□ -1.72
PHF3-210ENST00000509876 GUCA2BQ16661 112 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 RPEL1Q2QD12 228 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OR10S1Q8NGN2 331 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OR4A5Q8NH83 315 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OR1A1Q9P1Q5 309 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 CCDC88CQ9P219 2028 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 PLXND1Q9Y4D7 1925 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OOSP1A8MZH6 123 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 DUS4LO95620 317 aaKnown RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 HTR2BP41595 481 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OR2F1Q13607 317 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 ZNF674Q2M3X9 581 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 TIGITQ495A1 244 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 RNF138Q8WVD3 245 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms