RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FAM90A23PA8MXZ1 464 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 RRHO14718 337 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 PDCD6O75340 191 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 CRTAPO75718 401 aaPredicted RBP12.2□□□□□ -0.46
RAB40C-202ENST00000509637 SRSF7Q16629 238 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAB40C-202ENST00000509637 YIF1BQ5BJH7 314 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 ZFP1Q6P2D0 407 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 IL34Q6ZMJ4 242 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 TMPRSS11AQ6ZMR5 421 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 PQLC1Q8N2U9 271 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 ABHD14BQ96IU4 210 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
RAB40C-202ENST00000509637 A0A0A6YYD4 124 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 H0YJW9 148 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 CA11O75493 328 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 GLAP06280 429 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 IGHV4-30-4P0DP06 118 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 HTR2CP28335 458 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 ZNF660Q6AZW8 331 aaPredicted RBP12.19□□□□□ -0.46
RAB40C-202ENST00000509637 ZNF880Q6PDB4 577 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 TRAT1Q6PIZ9 186 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 ADAMTSL5Q6ZMM2 481 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 C6orf201Q7Z4U5 140 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 CLCC1Q96S66 551 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 NICN1Q9BSH3 213 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 ADAM30Q9UKF2 790 aa12.19□□□□□ -0.46
RAB40C-202ENST00000509637 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
RAB40C-202ENST00000509637 EXOSC1Q9Y3B2 195 aaKnown RBP12.19□□□□□ -0.46
RAB40C-202ENST00000509637 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
RAB40C-202ENST00000509637 QRFPP83859 136 aa12.18□□□□□ -0.46
RAB40C-202ENST00000509637 CD200R1LQ6Q8B3 271 aa12.18□□□□□ -0.46
RAB40C-202ENST00000509637 ZNF554Q86TJ5 538 aa12.18□□□□□ -0.46
RAB40C-202ENST00000509637 LRRTM1Q86UE6 522 aa12.18□□□□□ -0.46
RAB40C-202ENST00000509637 CDH26Q8IXH8 852 aa12.18□□□□□ -0.46
RAB40C-202ENST00000509637 LFNGQ8NES3 379 aa12.18□□□□□ -0.46
RAB40C-202ENST00000509637 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
RAB40C-202ENST00000509637 RBMXL2O75526 392 aaKnown RBP12.17□□□□□ -0.46
RAB40C-202ENST00000509637 NAPSAO96009 420 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 IGLV1-51P01701 117 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
RAB40C-202ENST00000509637 CAPGP40121 348 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 ST3GAL4Q11206 333 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 UNC119Q13432 240 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 PSG5Q15238 335 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 SVOPQ8N4V2 548 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 DRAXINQ8NBI3 349 aaPredicted RBP12.17□□□□□ -0.46
RAB40C-202ENST00000509637 OR5AN1Q8NGI8 311 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 GALMQ96C23 342 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 CNOT2Q9NZN8 540 aaKnown RBP12.17□□□□□ -0.46
RAB40C-202ENST00000509637 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
RAB40C-202ENST00000509637 CD37P11049 281 aa12.16□□□□□ -0.46
RAB40C-202ENST00000509637 DEFA5Q01523 94 aa12.16□□□□□ -0.46
RAB40C-202ENST00000509637 UNQ5815/PRO19632Q6UWF5 114 aa12.16□□□□□ -0.46
RAB40C-202ENST00000509637 OR6Q1Q8NGQ2 317 aa12.16□□□□□ -0.46
RAB40C-202ENST00000509637 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
RAB40C-202ENST00000509637 THAP7Q9BT49 309 aaPredicted RBP12.16□□□□□ -0.46
RAB40C-202ENST00000509637 C11orf54Q9H0W9 315 aaPredicted RBP12.16□□□□□ -0.46
RAB40C-202ENST00000509637 RAB9BQ9NP90 201 aa12.16□□□□□ -0.46
RAB40C-202ENST00000509637 SMPD3Q9NY59 655 aaPredicted RBP12.16□□□□□ -0.46
RAB40C-202ENST00000509637 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 A8MZ25 164 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 IGKV1-16P04430 117 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 CELP19835 753 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 PJVKQ0ZLH3 352 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 AKIRIN2Q53H80 203 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 C1orf100Q5SVJ3 147 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 ZNF383Q8NA42 475 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 GFI1Q99684 422 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 CST11Q9H112 138 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 CKLFQ9UBR5 152 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 SLC23A1Q9UHI7 598 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 RNF150Q9ULK6 438 aa12.15□□□□□ -0.46
RAB40C-202ENST00000509637 IZUMO1RA6ND01 250 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 CA2P00918 260 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 GNAO1P09471 354 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 OR8U9P0C7N5 309 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 MYL12AP19105 171 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 TPPP2P59282 170 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 RPS27AP62979 156 aaKnown RBP12.14□□□□□ -0.47
RAB40C-202ENST00000509637 PITPNAQ00169 270 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 ACTBL2Q562R1 376 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 FAM71F2Q6NXP2 309 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 ZNF562Q6V9R5 426 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 UQCC2Q9BRT2 126 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 ZMAT4Q9H898 229 aa12.14□□□□□ -0.47
RAB40C-202ENST00000509637 METTL1Q9UBP6 276 aaKnown RBP12.14□□□□□ -0.47
RAB40C-202ENST00000509637 FOXI3A8MTJ6 420 aaPredicted RBP12.13□□□□□ -0.47
RAB40C-202ENST00000509637 TMEM14DPA8MWL7 114 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 RAB29O14966 203 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 SOCS1O15524 211 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 IGLV2-23P01705 113 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms