RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 SRP14P37108 136 aaKnown RBP7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 MPLP40238 635 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 IGFBP7Q16270 282 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM241Q24JQ0 296 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 LBHQ53QV2 105 aaPredicted RBP7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 OR2T2Q6IF00 324 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 FGFRL1Q8N441 504 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM251Q8N6I4 163 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 MDS2Q8NDY4 140 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 OR51G1Q8NGK1 321 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 GFOD1Q9NXC2 390 aa7.77□□□□□ -1.16
PDGFRA-208ENST00000509490 A0A096LPE4 126 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 TMPRSS2O15393 492 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 LILRA1O75019 489 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 ZNF737O75373 536 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 CLN3Q13286 438 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 JOSD1Q15040 202 aaPredicted RBP7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 CDCP2Q5VXM1 449 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 FBXW9Q5XUX1 488 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 SLC25A24Q6NUK1 477 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 ZNF66Q6ZN08 573 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 C1orf122Q6ZSJ8 110 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 ZNF383Q8NA42 475 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 RDH5Q92781 318 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 RBKSQ9H477 322 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 LRRC30A6NM36 301 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 HS3ST1O14792 307 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 SH2D1BO14796 132 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 RHBDL1O75783 438 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 CLDN14O95500 239 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 IGKV1D-33P01593 117 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 IGKV1-33P01594 117 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 FAM3BP58499 235 aaPredicted RBP7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 SPINK14Q6IE38 97 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 SCCPDHQ8NBX0 429 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 OR10D4PQ8NGN7 298 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 OR4X1Q8NH49 305 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 THOC3Q96J01 351 aaKnown RBP7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 ZNF488Q96MN9 340 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 PFDN5Q99471 154 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 HIST1H2BLQ99880 126 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 PRSS50Q9UI38 385 aa7.77□□□□□ -1.17
PDGFRA-208ENST00000509490 TMEM30CPA0ZSE6 113 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 SMPD2O60906 423 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 CFIP05156 583 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 CELA3AP09093 270 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 GPX4P36969 197 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 LCN2P80188 198 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 MAJINQ3KP22 176 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 ABHD17BQ5VST6 288 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 NCR3LG1Q68D85 454 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 REC114Q7Z4M0 266 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 TMEM170AQ8WVE7 144 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 GPR61Q9BZJ8 451 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 RTTNQ86VV8 2226 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 ZFP92A6NM28 416 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 MLNRO43193 412 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 MT-CO3P00414 261 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 IGHV3-9P01782 118 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 CCL2P13500 99 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 SSTP61278 116 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 OR1C1Q15619 314 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 TBC1D28Q2M2D7 210 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 BSXQ3C1V8 233 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 ACSM6Q6P461 480 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 LCN15Q6UWW0 184 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 Q8N7P7 452 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 LHX4Q969G2 390 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 RAB24Q969Q5 203 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 SLC39A9Q9NUM3 307 aa7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 KLF13Q9Y2Y9 288 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-208ENST00000509490 ARGFXA6NJG6 315 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 H3BP45 60 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 IFNL4K9M1U5 179 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 HRASP01112 189 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 IAPPP10997 89 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 PSMB3P49720 205 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 TMPRSS3P57727 454 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 ZXDAP98168 799 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 CATR1Q13166 79 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 SSX2Q16385 188 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 TRAT1Q6PIZ9 186 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 C17orf78Q8N4C9 275 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 MAFAQ8NHW3 353 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 C5orf30Q96GV9 206 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 LURAP1Q96LR2 239 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 TAAR6Q96RI8 345 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 TRAPPC2LQ9UL33 140 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 OOEPA6NGQ2 149 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 CEBPZOSA8MTT3 80 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 HSPB6O14558 160 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 TNFSF15O95150 251 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 CCNOP22674 350 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 CA6P23280 308 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms