RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DYNC2LI1Q8TCX1 351 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 MDFIQ99750 246 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 TOLLIPQ9H0E2 274 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 NECAP2Q9NVZ3 263 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 RDH8Q9NYR8 311 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 ZNF230Q9UIE0 474 aaPredicted RBP7.36□□□□□ -1.23
NUP54-207ENST00000508583 MRPS7Q9Y2R9 242 aaKnown RBP7.36□□□□□ -1.23
NUP54-207ENST00000508583 CEPT1Q9Y6K0 416 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 SAA2-SAA4A0A096LPE2 208 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 A0A1W2PPI3 338 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 A6NDX4 124 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 OR2F2O95006 317 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 EIF4EP06730 217 aaKnown RBP7.35□□□□□ -1.23
NUP54-207ENST00000508583 SAA2P0DJI9 122 aaPredicted RBP7.35□□□□□ -1.23
NUP54-207ENST00000508583 TMEM11P17152 192 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 ELK1P19419 428 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 MC5RP33032 325 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 GPR12P47775 334 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 RAB13P51153 203 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 ZNF134P52741 427 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 ACTBP60709 375 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 MRPS10P82664 201 aaKnown RBP7.35□□□□□ -1.23
NUP54-207ENST00000508583 CBX3Q13185 183 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 HABP2Q14520 560 aaPredicted RBP7.35□□□□□ -1.23
NUP54-207ENST00000508583 HERPUD1Q15011 391 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 LDLRAD2Q5SZI1 272 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 C12orf54Q6X4T0 127 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 Q6ZPA2 131 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 ZNF833PQ6ZTB9 187 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 HOGA1Q86XE5 327 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 DRAM1Q8N682 238 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 OR8H1Q8NGG4 311 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 OR2T10Q8NGZ9 312 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 OR2T6Q8NHC8 308 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 BORCS5Q969J3 196 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 ST6GALNAC6Q969X2 333 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 C6orf62Q9GZU0 229 aaPredicted RBP7.35□□□□□ -1.23
NUP54-207ENST00000508583 IFI27L2Q9H2X8 130 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 C1RLQ9NZP8 487 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 OR1A1Q9P1Q5 309 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 EXTL2Q9UBQ6 330 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 MMP24Q9Y5R2 645 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 A3GALT2U3KPV4 340 aa7.35□□□□□ -1.23
NUP54-207ENST00000508583 IGKV1-6A0A0C4DH72 117 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 OR5H14A6NHG9 310 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 FAM90A9PA6NNJ1 464 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 SLC31A2O15432 143 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 SSX5O60225 188 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 TSPAN9O75954 239 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 MOSP00540 346 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 S100A5P33763 92 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 RCVRNP35243 200 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 OR3A3P47888 321 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 REG1BP48304 166 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 ACTBL2Q562R1 376 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 IGSF11Q5DX21 431 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 ARSJQ5FYB0 599 aaPredicted RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 UTF1Q5T230 341 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 SNX29P2Q8IUI4 249 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 H1FOOQ8IZA3 346 aaPredicted RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 MCFD2Q8NI22 146 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 PIFOQ8TCI5 191 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 MAFIPQ8WZ33 124 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 DGCR14Q96DF8 476 aaKnown RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 ADTRPQ96IZ2 230 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 CYYR1Q96J86 154 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 RBM14Q96PK6 669 aaKnown RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 AGMATQ9BSE5 352 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 SLC25A33Q9BSK2 321 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 PRSS22Q9GZN4 317 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 C11orf54Q9H0W9 315 aaPredicted RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 RBM38Q9H0Z9 239 aaKnown RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 MMP27Q9H306 513 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 ELF5Q9UKW6 265 aaPredicted RBP7.34□□□□□ -1.23
NUP54-207ENST00000508583 GAB2Q9UQC2 676 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 MOB4Q9Y3A3 225 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
NUP54-207ENST00000508583 CLPSL1A2RUU4 121 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 FGF16O43320 207 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 PEX14O75381 377 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 RBBP9O75884 186 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 HLA-DQB1P01920 261 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 APOA2P02652 100 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 SNRNP70P08621 437 aaKnown RBP7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR8U9P0C7N5 309 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR5H8P0DN80 308 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 TBPP20226 339 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 PAX6P26367 422 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 LUMP51884 338 aaPredicted RBP7.33□□□□□ -1.24
NUP54-207ENST00000508583 SSBP1Q04837 148 aaKnown RBP7.33□□□□□ -1.24
NUP54-207ENST00000508583 LSAMPQ13449 338 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 CDK10Q15131 360 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 AWAT1Q58HT5 328 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 PYHIN1Q6K0P9 492 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 TMEM219Q86XT9 240 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 LAX1Q8IWV1 398 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms