RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 IL36GQ9NZH8 169 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 KIAA1456Q9P272 454 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 GNG12Q9UBI6 72 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 EXOSC1Q9Y3B2 195 aaKnown RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 FBXO7Q9Y3I1 522 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 NUBP2Q9Y5Y2 271 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 J3QRE1 110 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 AIPO00170 330 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 MAGEB3O15480 346 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 SPINT2O43291 252 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 SLC25A17O43808 307 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 RGS11O94810 467 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 IGHV3-11P01762 117 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 RAB3AP20336 220 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 ZP3P21754 424 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 TMBIM6P55061 237 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 TMEM267Q0VDI3 215 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-211ENST00000508546 MED22Q15528 200 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 CNPY1Q3B7I2 92 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 GTSCR1Q86UQ5 136 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 OR52N1Q8NH53 320 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 CASTOR1Q8WTX7 329 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 TMEM106AQ96A25 262 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 GPER1Q99527 375 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 NABP2Q9BQ15 211 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 TMED9Q9BVK6 235 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 FUNDC2Q9BWH2 189 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 SLA2Q9H6Q3 261 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 RNF150Q9ULK6 438 aa7.16□□□□□ -1.26
NEDD9-211ENST00000508546 EXOGQ9Y2C4 368 aaKnown RBP7.16□□□□□ -1.26
NEDD9-211ENST00000508546 LSM2Q9Y333 95 aaKnown RBP7.16□□□□□ -1.26
NEDD9-211ENST00000508546 DAPL1A0PJW8 107 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 SHISA3A0PJX4 238 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 TMEM212A6NML5 194 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 H3BMQ9 156 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 GEMIN2O14893 280 aaKnown RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 GABARAPO95166 117 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 HBZP02008 142 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 HSMCR30P0CW71 290 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 ETV1P50549 477 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 WNT4P56705 351 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 CX3CL1P78423 397 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 KLF5Q13887 457 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 SPHARQ15513 63 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 MORN2Q502X0 79 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 AKIRIN2Q53H80 203 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 ATAD3CQ5T2N8 411 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 C6orf183Q5T699 404 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 TRAT1Q6PIZ9 186 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 IL34Q6ZMJ4 242 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 ODF3L1Q8IXM7 274 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 GAPTQ8N292 157 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 RPP25LQ8N5L8 163 aaKnown RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 ACBD7Q8N6N7 88 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 NANOGP1Q8N7R0 232 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 OR10V1Q8NGI7 309 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 OR51A2Q8NGJ7 313 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 NEK7Q8TDX7 302 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 YIPF6Q96EC8 236 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 C4orf36Q96KX1 117 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 BCL7BQ9BQE9 202 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 MRPL20Q9BYC9 149 aaKnown RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 NAA50Q9GZZ1 169 aaKnown RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 METTL9Q9H1A3 318 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 RANGRFQ9HD47 186 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-211ENST00000508546 RETNQ9HD89 108 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 ERVK13-1Q9NX77 482 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 PTTG2Q9NZH5 202 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 CLEC2DQ9UHP7 191 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 DHDHQ9UQ10 334 aa7.15□□□□□ -1.26
NEDD9-211ENST00000508546 J3QLW9 94 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 RRHO14718 337 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 CDRT1O95170 752 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 LY6G6CO95867 125 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 LIMS3P0CW19 117 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 LIMS4P0CW20 117 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 CD36P16671 472 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF19P17023 458 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 CD40LGP29965 261 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 TPPP2P59282 170 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 MLLT11Q13015 90 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-211ENST00000508546 MOGAT2Q3SYC2 334 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 ACTBL2Q562R1 376 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 LY6G6FQ5SQ64 297 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 OR2G6Q5TZ20 316 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 LCN12Q6JVE5 192 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF833PQ6ZTB9 187 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 Q8N402 240 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 OR9G4Q8NGQ1 327 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 OR1L1Q8NH94 360 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 MRPL48Q96GC5 212 aaKnown RBP7.14□□□□□ -1.27
NEDD9-211ENST00000508546 MYCBPQ99417 103 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-211ENST00000508546 MGLLQ99685 303 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 FAM110AQ9BQ89 295 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 ABHD14AQ9BUJ0 271 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 SPACA1Q9HBV2 294 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 OR2S2Q9NQN1 319 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms