RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, human

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-210	ENST00000508235	HERPUD1	Q15011	391 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	IGSF11	Q5DX21	431 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	CNIH2	Q6PI25	160 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235		Q6ZSV7	163 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	TMEM219	Q86XT9	240 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	ODF3L1	Q8IXM7	274 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	C3orf56	Q8N813	242 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	RBM14	Q96PK6	669 aa	Known RBP	12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	RDH8	Q9NYR8	311 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	CCDC59	Q9P031	241 aa	Known RBP	12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	ZNF221	Q9UK13	617 aa		12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	FBN1	P35555	2871 aa	Known RBP	12.03	□□□□□ -0.48
RNF4-210	ENST00000508235	SAA2-SAA4	A0A096LPE2	208 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	CLPSL1	A2RUU4	121 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	FAM25A	B3EWG3	89 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	FAM25C	B3EWG5	89 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	FAM25G	B3EWG6	89 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235		H3BMQ9	156 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	ST8SIA5	O15466	376 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	EIF4E	P06730	217 aa	Known RBP	12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	SAA2	P0DJI9	122 aa	Predicted RBP	12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	TMEM11	P17152	192 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	CD24	P25063	80 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	C11orf88	Q6PI97	169 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	ZNF833P	Q6ZTB9	187 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	OR2T10	Q8NGZ9	312 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	OR2T6	Q8NHC8	308 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	DYNC2LI1	Q8TCX1	351 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	AGMAT	Q9BSE5	352 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	SLC25A33	Q9BSK2	321 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	C11orf54	Q9H0W9	315 aa	Predicted RBP	12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	IFT46	Q9NQC8	304 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	ANXA10	Q9UJ72	324 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	ADAM30	Q9UKF2	790 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	CEPT1	Q9Y6K0	416 aa		12.02	□□□□□ -0.49
RNF4-210	ENST00000508235	TPPP	O94811	219 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	IGKV1D-33	P01593	117 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	IGKV1-33	P01594	117 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	ELK1	P19419	428 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	MDK	P21741	143 aa	Predicted RBP	12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	PRSS3	P35030	304 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	ARPC4	P59998	168 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	EBI3	Q14213	229 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	HOGA1	Q86XE5	327 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	BEST4	Q8NFU0	473 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	LINC01006	Q8NI28	216 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	C15orf40	Q8WUR7	153 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	PRSS22	Q9GZN4	317 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	MOB4	Q9Y3A3	225 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	RNF114	Q9Y508	228 aa		12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	RBM7	Q9Y580	266 aa	Known RBP	12.01	□□□□□ -0.49
RNF4-210	ENST00000508235	IGKV1D-8	A0A087WSZ0	117 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	ZNF701	M0R085	212 aa	Predicted RBP	12	□□□□□ -0.49
RNF4-210	ENST00000508235	RGS5	O15539	181 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	MOS	P00540	346 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	GPR12	P47775	334 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	LSAMP	Q13449	338 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235		Q8N2B8	174 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	OR8H1	Q8NGG4	311 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	TAF15	Q92804	592 aa	Known RBP eCLIP	12	□□□□□ -0.49
RNF4-210	ENST00000508235	ABHD14B	Q96IU4	210 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	PARP12	Q9H0J9	701 aa	Known RBP	12	□□□□□ -0.49
RNF4-210	ENST00000508235	SCPEP1	Q9HB40	452 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	GAB2	Q9UQC2	676 aa		12	□□□□□ -0.49
RNF4-210	ENST00000508235	MRPS7	Q9Y2R9	242 aa	Known RBP	12	□□□□□ -0.49
RNF4-210	ENST00000508235	IGHV3-72	A0A0B4J1Y9	119 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	HLA-DQB1	P01920	261 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	MC5R	P33032	325 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	OR3A3	P47888	321 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	NABP2	Q9BQ15	211 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	ZNF747	Q9BV97	191 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	NECAP2	Q9NVZ3	263 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	EXTL2	Q9UBQ6	330 aa		11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	RSL24D1	Q9UHA3	163 aa	Known RBP	11.99	□□□□□ -0.49
RNF4-210	ENST00000508235	OR5H14	A6NHG9	310 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	SULT1C2	O00338	296 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	FGF16	O43320	207 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	SLC22A5	O76082	557 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	OR8U9	P0C7N5	309 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	PTHLH	P12272	177 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	HNF4G	Q14541	408 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	RPL39P5	Q59GN2	51 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	SHISA2	Q6UWI4	295 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	GVQW1	Q8N7I0	195 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	OR5AP2	Q8NGF4	316 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	OR8U1	Q8NH10	309 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	EAF1	Q96JC9	268 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	ZNF251	Q9BRH9	671 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	MRPL20	Q9BYC9	149 aa	Known RBP	11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	OR2D2	Q9H210	308 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	RNF150	Q9ULK6	438 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	RABL2B	Q9UNT1	228 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	OR2W1	Q9Y3N9	320 aa		11.98	□□□□□ -0.49
RNF4-210	ENST00000508235	LUM	P51884	338 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF4-210	ENST00000508235	TAS2R46	P59540	309 aa		11.97	□□□□□ -0.49
RNF4-210	ENST00000508235	SNX29P2	Q8IUI4	249 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms