RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 H3BN98 237 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 TNFRSF11BO00300 401 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 PRODHO43272 600 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 GGCTO75223 188 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 GMNNO75496 209 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 CCNB2O95067 398 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 S1PR2O95136 353 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 FADS2O95864 444 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 AMBPP02760 352 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 PRH1P02810 166 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 DBTP11182 482 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 ZNF20P17024 532 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 MAP2K4P45985 399 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 VSNL1P62760 191 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 SUMO1P63165 101 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 RHOGP84095 191 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 MED21Q13503 144 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 RIPK1Q13546 671 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 TMEM187Q14656 261 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 ZSCAN26Q16670 478 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 FAM106AQ4KMX7 169 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 MORN2Q502X0 79 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 ZNF585BQ52M93 769 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 SLC35D3Q5M8T2 416 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 SAXO1Q8IYX7 474 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 C6orf223Q8N319 242 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 ADAD2Q8NCV1 583 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 OR52L2PQ8NGH6 319 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 OR10K1Q8NGX5 313 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 KCNG3Q8TAE7 436 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 PP6455Q8WZ26 134 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 GHSRQ92847 366 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 PYURFQ96I23 114 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 PHB2Q99623 299 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 AKIP1Q9NQ31 210 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 ZNF581Q9P0T4 197 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 TRAPPC2LQ9UL33 140 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 SAMD4AQ9UPU9 718 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 RPL36Q9Y3U8 105 aaKnown RBP5.22□□□□□ -1.57
VCAN-207ENST00000507162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 IGHV4-28A0A0C4DH34 117 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 TMEM213A2RRL7 107 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 AIPO00170 330 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 NME4O00746 187 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 KRT36O76013 467 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 OR7C1O76099 320 aaPredicted RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 CA1P00915 261 aaPredicted RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 IGHV3-23P01764 117 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 HBZP02008 142 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 MT-ND4P03905 459 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 FABP3P05413 133 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ADMP35318 185 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 MAGOHP61326 146 aaKnown RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 ADARB1P78563 741 aaKnown RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 PJVKQ0ZLH3 352 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 GINS1Q14691 196 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ZNF124Q15973 351 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 PIGYQ3MUY2 71 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ODF3L2Q3SX64 289 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ATAD3CQ5T2N8 411 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ARPINQ7Z6K5 226 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 SERPINA12Q8IW75 414 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ODF3L1Q8IXM7 274 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ANP32BQ92688 251 aaKnown RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 FAM46BQ96A09 425 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 SPSB1Q96BD6 273 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 C10orf35Q96D05 121 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 TMEM68Q96MH6 324 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ABHD14AQ9BUJ0 271 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 RAB9BQ9NP90 201 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 RCC2Q9P258 522 aaKnown RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 ENOPH1Q9UHY7 261 aa5.21□□□□□ -1.58
VCAN-207ENST00000507162 ZNF230Q9UIE0 474 aaPredicted RBP5.21□□□□□ -1.58
VCAN-207ENST00000507162 SAA2-SAA4A0A096LPE2 208 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 A0A0G2JND7 137 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 LOC107986453A0A1B0GWG9 222 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 FAM90A23PA8MXZ1 464 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 H3BNX3 289 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 FAM229AH3BQW9 127 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 RGS13O14921 159 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 CD74P04233 296 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 SAA2P0DJI9 122 aaPredicted RBP5.2□□□□□ -1.58
VCAN-207ENST00000507162 CT45A6P0DMU7 189 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 CT45A5P0DMU8 189 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 CT45A7P0DMV0 189 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 MC5RP33032 325 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 PPP1CCP36873 323 aaKnown RBP5.2□□□□□ -1.58
VCAN-207ENST00000507162 HMGA2P52926 109 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 XGP55808 180 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 PAX5Q02548 391 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 IL13RA2Q14627 380 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 GNMTQ14749 295 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 MAPRE2Q15555 327 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 C12orf74Q32Q52 190 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 TMEM30BQ3MIR4 351 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 SLC25A30Q5SVS4 291 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 SYT6Q5T7P8 510 aaPredicted RBP5.2□□□□□ -1.58
VCAN-207ENST00000507162 ASCL4Q6XD76 172 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms