RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 UNC119Q13432 240 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 FAM27D1Q5T7N8 215 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 OR10K2Q6IF99 312 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 C18orf65Q6ZTR6 163 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 FAM89BQ8N5H3 189 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 ACOT13Q9NPJ3 140 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 HSPA12AO43301 675 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 MYF6P23409 242 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 SERPINB10P48595 397 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 HSPA13P48723 471 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 FHL3Q13643 280 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 INSL4Q14641 139 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 RAB11BQ15907 218 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 LIPKQ5VXJ0 399 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 PYHIN1Q6K0P9 492 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 PRSS48Q7RTY5 328 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 OR56B1Q8NGI3 324 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 ANKRD60Q9BZ19 345 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 LPAR5Q9H1C0 372 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 BLOC1S6Q9UL45 172 aa11.28□□□□□ -0.6
HMGCS1-203ENST00000507004 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 ARPC1BO15143 372 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 IGLV1-40P01703 118 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 GSTP1P09211 210 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 CPEP16870 476 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 CD40LGP29965 261 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 CRIP2P52943 208 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 HLA-DRB3P79483 266 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 MRPS15P82914 257 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 PTX4Q96A99 478 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 NICN1Q9BSH3 213 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.61
HMGCS1-203ENST00000507004 SEC14L6B5MCN3 397 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 RRHO14718 337 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 PDCD5O14737 125 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 ATP6V0E1O15342 81 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 ST8SIA5O15466 376 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 SPDEFO95238 335 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 DIRAS3O95661 229 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 OR3A3P47888 321 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF616Q08AN1 781 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 PLGLAQ15195 96 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 P2RY14Q15391 338 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 OR5AN1Q8NGI8 311 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 TMEM203Q969S6 136 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 TSNAXQ99598 290 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 MGLLQ99685 303 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 CMSS1Q9BQ75 279 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 CCDC90BQ9GZT6 254 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 Q9N2K0 584 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF221Q9UK13 617 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 V9GY05 133 aa11.26□□□□□ -0.61
HMGCS1-203ENST00000507004 H7C2Y5 167 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 CEACAM6P40199 344 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 RAB9AP51151 201 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 AQP4P55087 323 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 TAGLNQ01995 201 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 ARL6IP1Q15041 203 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 CD200R1LQ6Q8B3 271 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 FAM131AQ6UXB0 335 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 AK3Q9UIJ7 227 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 AK6Q9Y3D8 172 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 WSB1Q9Y6I7 421 aa11.25□□□□□ -0.61
HMGCS1-203ENST00000507004 FOXI3A8MTJ6 420 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 H0YJW9 148 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 I3L521 148 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 SOCS1O15524 211 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 APOA2P02652 100 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 CRHBPP24387 322 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 GADD45AP24522 165 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 TBCEQ15813 527 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 DEFB136Q30KP8 78 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms