RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 TMEM69Q5SWH9 247 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 THNSL2Q86YJ6 484 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 GVQW1Q8N7I0 195 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 AP3S1Q92572 193 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 ABHD14BQ96IU4 210 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 CMTM3Q96MX0 182 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 ZNF251Q9BRH9 671 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 SLC25A33Q9BSK2 321 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 RBM38Q9H0Z9 239 aaKnown RBP14.53□□□□□ -0.08
NPHP4-210ENST00000506941 C16orf95Q9H693 158 aa14.53□□□□□ -0.08
NPHP4-210ENST00000506941 ZNF736B4DX44 427 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-210ENST00000506941 TXNL1O43396 289 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 OR2F2O95006 317 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 IGKV1D-33P01593 117 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 IGKV1-33P01594 117 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 RPL39P5Q59GN2 51 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 MZT2AQ6P582 158 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 OR10J5Q8NHC4 309 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 EDARADDQ8WWZ3 215 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 RBM14Q96PK6 669 aaKnown RBP14.52□□□□□ -0.09
NPHP4-210ENST00000506941 MRPL20Q9BYC9 149 aaKnown RBP14.52□□□□□ -0.09
NPHP4-210ENST00000506941 NPFFR1Q9GZQ6 430 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 ZNF702PQ9H963 129 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 BEX1Q9HBH7 125 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 SIGLEC9Q9Y336 463 aa14.52□□□□□ -0.09
NPHP4-210ENST00000506941 CLPSL1A2RUU4 121 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 MEIS3P1A6NDR6 274 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 NOL3O60936 208 aaKnown RBP14.51□□□□□ -0.09
NPHP4-210ENST00000506941 AMY1AP04745 511 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 AMY2AP04746 511 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 FAM106CPP0CH98 169 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 LSAMPQ13449 338 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 EBI3Q14213 229 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 Q6ZS46 218 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 C16orf82Q7Z2V1 217 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 OR4C13Q8NGP0 309 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 MIXL1Q9H2W2 232 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 RANBP3Q9H6Z4 567 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-210ENST00000506941 CCDC59Q9P031 241 aaKnown RBP14.51□□□□□ -0.09
NPHP4-210ENST00000506941 ANXA10Q9UJ72 324 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 RNF150Q9ULK6 438 aa14.51□□□□□ -0.09
NPHP4-210ENST00000506941 RAB29O14966 203 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 PROP1O75360 226 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 HLA-DQB1P01920 261 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 FCER2P06734 321 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 LPLP06858 475 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 TMEM11P17152 192 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 CD1BP29016 333 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 SOX6P35712 828 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 BLCAPP62952 87 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 HES1Q14469 280 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 HNF4GQ14541 408 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 FAM71F2Q6NXP2 309 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 HOGA1Q86XE5 327 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 H1FOOQ8IZA3 346 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-210ENST00000506941 Q8N6K4 173 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 BEST4Q8NFU0 473 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 SNAPC3Q92966 411 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 EAF1Q96JC9 268 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-210ENST00000506941 NABP2Q9BQ15 211 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 GINS4Q9BRT9 223 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 PIPOXQ9P0Z9 390 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 RNF114Q9Y508 228 aa14.5□□□□□ -0.09
NPHP4-210ENST00000506941 A0A1B0GUS0 222 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 PROK1P58294 105 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 CNIH2Q6PI25 160 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 Q8N2B8 174 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 C3orf56Q8N813 242 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 WFDC12Q8WWY7 111 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 C5orf30Q96GV9 206 aa14.49□□□□□ -0.09
NPHP4-210ENST00000506941 SH2D7A6NKC9 451 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-210ENST00000506941 FAM25AB3EWG3 89 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 FAM25CB3EWG5 89 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 FAM25GB3EWG6 89 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 CTDSP2O14595 271 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 OR8U9P0C7N5 309 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 CBX5P45973 191 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 KRTAP10-3P60369 221 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 LAX1Q8IWV1 398 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 OR8U1Q8NH10 309 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 S1PR3Q99500 378 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 SLIRPQ9GZT3 109 aaKnown RBP14.48□□□□□ -0.09
NPHP4-210ENST00000506941 OR2D2Q9H210 308 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 ANAPC10Q9UM13 185 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 MRPS7Q9Y2R9 242 aaKnown RBP14.48□□□□□ -0.09
NPHP4-210ENST00000506941 MOB4Q9Y3A3 225 aa14.48□□□□□ -0.09
NPHP4-210ENST00000506941 PLXNB1O43157 2135 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 SMIM31A0A1B0GVY4 71 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 CCDC160A6NGH7 325 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 CTXN2P0C2S0 81 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 CT45A6P0DMU7 189 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 CT45A5P0DMU8 189 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 CT45A7P0DMV0 189 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 NFYAP23511 347 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-210ENST00000506941 PRSS3P35030 304 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 GPR12P47775 334 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 SRSF4Q08170 494 aaKnown RBP14.47□□□□□ -0.09
NPHP4-210ENST00000506941 TMEM95Q3KNT9 176 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 ABCA11PQ4W5N1 156 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 GLDNQ6ZMI3 551 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms