RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 OR4X1Q8NH49 305 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 ABHD14BQ96IU4 210 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 Q9BRP9 147 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 TREM1Q9NP99 234 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 CHMP5Q9NZZ3 219 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 SNX10Q9Y5X0 201 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 MAP3K19Q56UN5 1328 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 C11orf86A6NJI1 115 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 H3BPC8 53 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 K7ERQ8 282 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 STK16O75716 305 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 RD3LP0DJH9 198 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 OPRM1P35372 400 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 OR1E2P47887 323 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 STC1P52823 247 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 EXOC3L4Q17RC7 722 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 AGTRAPQ6RW13 159 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 SLC13A5Q86YT5 568 aaPredicted RBP1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 PLCZ1Q86YW0 608 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 SLC35F6Q8N357 371 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 ATP6V1C2Q8NEY4 427 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 OR51H1Q8NH63 302 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 FNDC9Q8TBE3 224 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 FGF13Q92913 245 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 ACY3Q96HD9 319 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 ZNF471Q9BX82 626 aaPredicted RBP1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 GLS2Q9UI32 602 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 TMEM94Q12767 1356 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 RTEL1-TNFRSF6BF6WH68 1400 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 DSCAMO60469 2012 aa1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 MDC1Q14676 2089 aaKnown RBP1.3□□□□□ -2.2
TOPBP1-204ENST00000505804 IGLV3-9A0A075B6K5 115 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 ARRDC5A6NEK1 342 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 SIGLEC16A6NMB1 481 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 SMLR1H3BR10 107 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 M0QX08 132 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 NEMFO60524 1076 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 ARL6IP5O75915 188 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 CD7P09564 240 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 NPPCP23582 126 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 PEBP1P30086 187 aaKnown RBP1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 AGTR1P30556 359 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 KDELR2P33947 212 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 DAPP51397 102 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 ZNHIT3Q15649 155 aaPredicted RBP1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 MESTQ5EB52 335 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 TMEM31Q5JXX7 168 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 SPATA31B1PQ5VZV4 182 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 SCGB1D4Q6XE38 83 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 GLT6D1Q7Z4J2 308 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 BOD1L2Q8IYS8 172 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 ZNF283Q8N7M2 679 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 OR4X2Q8NGF9 303 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 MRPS24Q96EL2 167 aaKnown RBP1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 SMIM12Q96EX1 92 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 TMEM208Q9BTX3 173 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 HHLA2Q9UM44 414 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 PRRC2BQ5JSZ5 2229 aaKnown RBP1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 PIK3R4Q99570 1358 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 DENND4BO75064 1496 aaPredicted RBP1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 WDR90Q96KV7 1748 aa1.29□□□□□ -2.2
TOPBP1-204ENST00000505804 GRIFINA4D1Z8 144 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 GNRH2O43555 120 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 IGLV3-27P01718 113 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 CCL3P10147 92 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 CRYBB3P26998 211 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 HSPA9P38646 679 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 SERPINB10P48595 397 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 XRCC4Q13426 336 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 ANGPT1Q15389 498 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 KRTAP21-3Q3LHN1 58 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 ATP5L2Q7Z4Y8 100 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 OR5AK3PQ8NH89 298 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 MED10Q9BTT4 135 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 GNB1LQ9BYB4 327 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 UBQLN4Q9NRR5 601 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 NDUFB11Q9NX14 153 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 MS4A12Q9NXJ0 267 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 LRPPRCP42704 1394 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 RGS12O14924 1447 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 SCN9AQ15858 1988 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 CHD5Q8TDI0 1954 aa1.28□□□□□ -2.2
TOPBP1-204ENST00000505804 LINC00854A0A1B0GVQ3 168 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 TMEM235A6NFC5 223 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 OR11H12B2RN74 326 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 MKRN2OSH3BPM6 223 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 J3QQQ9 107 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 PSMG1O95456 288 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 HBZP02008 142 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 GRPRP30550 384 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 CD151P48509 253 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 RPL26P61254 145 aaKnown RBP1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 SLAMF1Q13291 335 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 TBC1D28Q2M2D7 210 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 CRLF3Q8IUI8 442 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 BLIDQ8IZY5 108 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 OR11H2Q8NH07 326 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 MIEN1Q9BRT3 115 aa1.27□□□□□ -2.21
TOPBP1-204ENST00000505804 OR52A5Q9H2C5 316 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms