RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TIMM23BQ5SRD1 257 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 SCGB1D4Q6XE38 83 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 SELENOHQ8IZQ5 122 aaKnown RBP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR11H1Q8NG94 326 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR4X1Q8NH49 305 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR5AK3PQ8NH89 298 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 DYNC2LI1Q8TCX1 351 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 C16orf78Q8WTQ4 265 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 LRRC45Q96CN5 670 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 ABHD14BQ96IU4 210 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 EIF5A2Q9GZV4 153 aaKnown RBP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 METTL17Q9H7H0 456 aaPredicted RBP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 NDUFB11Q9NX14 153 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 GLS2Q9UI32 602 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 LINC00527Q9UJ94 153 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 ENPP5Q9UJA9 477 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 SNX12Q9UMY4 172 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 SNX10Q9Y5X0 201 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 PUS1Q9Y606 427 aaKnown RBP eCLIP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 VPS37CA5D8V6 355 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 C2orf74A8MZ97 194 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 C9J4A7 227 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 H3BPC8 53 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 J3QLI3 93 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 COPEO14579 308 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 LY6HO94772 140 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 HBZP02008 142 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 GPX1P07203 203 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 SLC35E2BP0CK96 405 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ESDP10768 282 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 NPPCP23582 126 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 F8A1P23610 371 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 CDK2P24941 298 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 OPRM1P35372 400 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 CRATP43155 626 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR1E2P47887 323 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 HINT1P49773 126 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 TAS2R45P59539 299 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ACTBP60709 375 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 DAD1P61803 113 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 DYNLL1P63167 89 aaKnown RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ACTG1P63261 375 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 BTN3A2P78410 334 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 DEFA6Q01524 100 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 C1DQ13901 141 aaKnown RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZBTB6Q15916 424 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 RASL11AQ6T310 242 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 COPS6Q7L5N1 327 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 SPATA24Q86W54 205 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 DOLPP1Q86YN1 238 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 CRLF3Q8IUI8 442 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 C10orf126Q8N4M7 172 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNF283Q8N7M2 679 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 CCDC112Q8NEF3 446 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR52E4Q8NGH9 312 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNRF2Q8NHG8 242 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ANGPTL6Q8NI99 470 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 LHFPL5Q8TAF8 219 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 FNDC9Q8TBE3 224 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 SUN5Q8TC36 379 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 TMEM56Q96MV1 263 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 TBX5Q99593 518 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 GPR22Q99680 433 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 Q9BRP9 147 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 MIEN1Q9BRT3 115 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 MED10Q9BTT4 135 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 CDCA4Q9BXL8 241 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 METTL9Q9H1A3 318 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 MED28Q9H204 178 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR52A5Q9H2C5 316 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ASCL3Q9NQ33 180 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 HHLA2Q9UM44 414 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 POFUT2Q9Y2G5 429 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 MRPS16Q9Y3D3 137 aaKnown RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZFHX2Q9C0A1 2572 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 LRPPRCP42704 1394 aaKnown RBP0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 RTEL1-TNFRSF6BF6WH68 1400 aa0.55□□□□□ -2.32
HMGB1P29-201ENST00000505659 CPAMD8Q8IZJ3 1885 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 REREQ9P2R6 1566 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGLV3-9A0A075B6K5 115 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGHV3-15A0A0B4J1V0 119 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 DAPL1A0PJW8 107 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 ERICH2A1L162 156 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 ARRDC5A6NEK1 342 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 F8VZ95 297 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SLC17A3O00476 420 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 GSTZ1O43708 216 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 STX10O60499 249 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 NEMFO60524 1076 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 ARL6IP5O75915 188 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SOD1P00441 154 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 CRYBA1P05813 215 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 UCHL1P09936 223 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR13C7P0DN81 318 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 PRB4P10163 310 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 ALOX5APP20292 161 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SYT1P21579 422 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 CRHBPP24387 322 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 KDELR2P33947 212 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 STC1P52823 247 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms