RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ADGRL4Q9HBW9 690 aa9.15□□□□□ -0.94
LSM6-204ENST00000504181 OR2S2Q9NQN1 319 aa9.15□□□□□ -0.94
LSM6-204ENST00000504181 CLN6Q9NWW5 311 aa9.15□□□□□ -0.94
LSM6-204ENST00000504181 TRAPPC2LQ9UL33 140 aa9.15□□□□□ -0.94
LSM6-204ENST00000504181 SAMHD1Q9Y3Z3 626 aaKnown RBP9.15□□□□□ -0.94
LSM6-204ENST00000504181 S1PR2O95136 353 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 HTR3BO95264 441 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 SSBP2P81877 361 aaPredicted RBP9.14□□□□□ -0.95
LSM6-204ENST00000504181 TMEM30BQ3MIR4 351 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 ATAD3CQ5T2N8 411 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 LPCAT4Q643R3 524 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 Q6ZRM9 215 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 Q6ZTC4 211 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 BCDIN3DQ7Z5W3 292 aaKnown RBP9.14□□□□□ -0.95
LSM6-204ENST00000504181 OR2C3Q8N628 320 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 UXS1Q8NBZ7 420 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 FEVQ99581 238 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 REEP1Q9H902 201 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 EFCAB1Q9HAE3 211 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 RAB9BQ9NP90 201 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
LSM6-204ENST00000504181 ZNF230Q9UIE0 474 aaPredicted RBP9.14□□□□□ -0.95
LSM6-204ENST00000504181 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 OR5H14A6NHG9 310 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 LGALS9O00182 355 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 ARPC2O15144 300 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 OR2C1O95371 312 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 HLA-DMBP28068 263 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 RIPK1Q13546 671 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 RSU1Q15404 277 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 MED22Q15528 200 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 C6orf141Q5SZD1 244 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 RBPMS2Q6ZRY4 209 aaKnown RBP9.13□□□□□ -0.95
LSM6-204ENST00000504181 C5orf24Q7Z6I8 188 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 LINC00596Q86U02 117 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 SLC38A6Q8IZM9 456 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 OR5B3Q8NH48 314 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 GALNT14Q96FL9 552 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 TVP23BQ9NYZ1 205 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 ENOPH1Q9UHY7 261 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 ST3GAL6Q9Y274 331 aa9.13□□□□□ -0.95
LSM6-204ENST00000504181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
LSM6-204ENST00000504181 METTL15A6NJ78 407 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 FAM90A23PA8MXZ1 464 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 H0YJW9 148 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 H3BNX3 289 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 GEMIN2O14893 280 aaKnown RBP9.12□□□□□ -0.95
LSM6-204ENST00000504181 SULT1B1O43704 296 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 RBBP9O75884 186 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 TUSC2O75896 110 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 IFNA10P01566 189 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 AMBPP02760 352 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 PRH1P02810 166 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 CT45A6P0DMU7 189 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 CT45A5P0DMU8 189 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 CT45A7P0DMV0 189 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 RCC1P18754 421 aaPredicted RBP9.12□□□□□ -0.95
LSM6-204ENST00000504181 RHOGP84095 191 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 ODF3L2Q3SX64 289 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 SPATS1Q496A3 300 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 RPL39P5Q59GN2 51 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 C6orf183Q5T699 404 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 TMEM244Q5VVB8 128 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 STX19Q8N4C7 294 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 PXT1Q8NFP0 134 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 OR51A4Q8NGJ6 313 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 OR13C3Q8NGS6 347 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 OR4A5Q8NH83 315 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 TNFAIP8L1Q8WVP5 186 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 FAM46BQ96A09 425 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 FAM192AQ9GZU8 254 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 IFT22Q9H7X7 185 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 WASHC3Q9Y3C0 194 aa9.12□□□□□ -0.95
LSM6-204ENST00000504181 GABRPO00591 440 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 GGCTO75223 188 aaKnown RBP9.11□□□□□ -0.95
LSM6-204ENST00000504181 SCTP09683 121 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 RBM11P57052 281 aaKnown RBP9.11□□□□□ -0.95
LSM6-204ENST00000504181 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 PJVKQ0ZLH3 352 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 OR2T5Q6IEZ7 315 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 OR2T29Q8NH02 315 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 GIPC3Q8TF64 312 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 TMEM68Q96MH6 324 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 GPER1Q99527 375 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 PHB2Q99623 299 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 CSTL1Q9H114 145 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 HRH4Q9H3N8 390 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 DMRT1Q9Y5R6 373 aa9.11□□□□□ -0.95
LSM6-204ENST00000504181 TRAV25A0A0B4J276 109 aa9.1□□□□□ -0.95
LSM6-204ENST00000504181 A0A1W2PQL4 384 aaPredicted RBP9.1□□□□□ -0.95
LSM6-204ENST00000504181 ZNF320A2RRD8 509 aa9.1□□□□□ -0.95
LSM6-204ENST00000504181 FAM223BA6NKX1 122 aa9.1□□□□□ -0.95
LSM6-204ENST00000504181 MPTX1A8MV57 137 aa9.1□□□□□ -0.95
LSM6-204ENST00000504181 SPDEFO95238 335 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms