RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 NPVFQ9HCQ7 196 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 PRDM6Q9NQX0 595 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 KCNIP2Q9NS61 270 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 MRPL16Q9NX20 251 aaKnown RBP5.1□□□□□ -1.59
LINC01340-201ENST00000504012 IL36GQ9NZH8 169 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 KCNIP1Q9NZI2 227 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 TAAR3PQ9P1P4 343 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 TRAPPC2LQ9UL33 140 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 WASHC3Q9Y3C0 194 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 RFNGQ9Y644 331 aa5.1□□□□□ -1.59
LINC01340-201ENST00000504012 C3orf85A0A1B0GTC6 90 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 A0A1B0GUS0 222 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 FEZF1A0PJY2 475 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 PRSS37A4D1T9 235 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 GRIFINA4D1Z8 144 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 NPIPB13A6NJU9 1138 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ANKRD30BLA7E2S9 258 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 KIAA1324LA8MWY0 1029 aaPredicted RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 NPIPB4C9JG80 1138 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF878C9JN71 531 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 H3BMH7 237 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 FCN1O00602 326 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ERI3O43414 337 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF207O43670 478 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 CHST1O43916 411 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 RBMXL2O75526 392 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 SCGB2A1O75556 95 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ACTL6BO94805 426 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 GPR75O95800 540 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 HLA-DQA1P01909 254 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 SP9P0CG40 484 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 CEBPBP17676 345 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 CCL1P22362 96 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF83P51522 516 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 RPL27P61353 136 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 MRPS34P82930 218 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF90Q03938 601 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 SRSF6Q13247 344 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 KLF5Q13887 457 aaPredicted RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ELAVL3Q14576 367 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 RTP5Q14D33 572 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 NMSQ5H8A3 153 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 CCDC144NLQ6NUI1 221 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 C22orf39Q6P5X5 142 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 RBPMS2Q6ZRY4 209 aaKnown RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 Q6ZS49 121 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 WDR5BQ86VZ2 330 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 OR8I2Q8N0Y5 310 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 OR5AS1Q8N127 324 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 ZNF439Q8NDP4 499 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 OR51T1Q8NGJ9 327 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 OR10G9Q8NGN4 311 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 OR4F5Q8NH21 305 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 VSTM2AQ8TAG5 236 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 TSKUQ8WUA8 353 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 RNF133Q8WVZ7 376 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 WBP2Q969T9 261 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 PIMREGQ9BSJ6 248 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 LYRM4Q9HD34 91 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 SIGLEC8Q9NYZ4 499 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 THAP10Q9P2Z0 257 aaPredicted RBP5.09□□□□□ -1.59
LINC01340-201ENST00000504012 EMC9Q9Y3B6 208 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 OR1A2Q9Y585 309 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 TNFRSF18Q9Y5U5 241 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 HS3ST3A1Q9Y663 406 aa5.09□□□□□ -1.59
LINC01340-201ENST00000504012 EML5Q05BV3 1969 aa5.09□□□□□ -1.6
LINC01340-201ENST00000504012 VWA8A3KMH1 1905 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 MUC21A0A0G2JKD1 596 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 A0A0J9YY10 115 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 MUC21A0A140T8X8 626 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 A0A1B0GX78 115 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 C17orf102A2RUQ5 167 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 C7orf71A4D174 169 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 FAM231BA6NCW3 169 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 C9JCJ5 164 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 K7EQM0 130 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 F2RL2O00254 374 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 SIVA1O15304 175 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 PHF1O43189 567 aaPredicted RBP5.08□□□□□ -1.6
LINC01340-201ENST00000504012 DUSP11O75319 330 aaKnown RBP5.08□□□□□ -1.6
LINC01340-201ENST00000504012 CST7O76096 145 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 TMEM50AO95807 157 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 TTRP02766 147 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 OR5AL1P0C617 328 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 SMIM10L1P0DMW3 83 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 ZNF17P17021 662 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 ZNF20P17024 532 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 PMCHP20382 165 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 ACP1P24666 158 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 BLVRBP30043 206 aaPredicted RBP5.08□□□□□ -1.6
LINC01340-201ENST00000504012 GPR183P32249 361 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 EMDP50402 254 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 UBE2G1P62253 170 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 RPL18Q07020 188 aaKnown RBP5.08□□□□□ -1.6
LINC01340-201ENST00000504012 DPTQ07507 201 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 LTC4SQ16873 150 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 SP6Q3SY56 376 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 TMEM177Q53S58 311 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 MUC21Q5SSG8 566 aa5.08□□□□□ -1.6
LINC01340-201ENST00000504012 Q6ZSR3 168 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms