RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 PHB2Q99623 299 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF436Q9C0F3 470 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 BPESC1Q9GZL8 116 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 OR2D2Q9H210 308 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 TAS2R3Q9NYW6 316 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 GNG12Q9UBI6 72 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 MIOXQ9UGB7 285 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 SHPKQ9UHJ6 478 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 RPUSD1Q9UJJ7 312 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 PSG11Q9UQ72 335 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 SPG11Q96JI7 2443 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 VPS13CQ709C8 3753 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 PTPN13Q12923 2485 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 TRBV23-1A0A0A0MS06 115 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 TRAV14DV4A0A0A6YYC5 116 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 TEX13DA0A0J9YY54 714 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 C3orf85A0A1B0GTC6 90 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 C17orf98A8MV24 154 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 VWC2LB2RUY7 222 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 H0Y980 276 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ITGB1BP1O14713 200 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC22A5O76082 557 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 IGKV1-39P01597 117 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 IGHV2-5P01817 119 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 IGKV1D-39P04432 117 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 GIPP09681 153 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ANXA3P12429 323 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 F2RP25116 425 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 UCP1P25874 307 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ZFP36P26651 326 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 LMO4P61968 165 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 PAX2Q02962 417 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 PRB3Q04118 309 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 C11orf91Q3C1V1 193 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ABCA11PQ4W5N1 156 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF585BQ52M93 769 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 LPCAT3Q6P1A2 487 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 BTNL3Q6UXE8 466 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 LIAT1Q6ZQX7 453 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 KCTD9Q7L273 389 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 SGPP2Q8IWX5 399 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 LRTM2Q8N967 370 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 CCDC71LQ8N9Z2 235 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 UXS1Q8NBZ7 420 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 OR8B3Q8NGG8 313 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 OR52M1Q8NGK5 317 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 CLDND2Q8NHS1 167 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 C10orf105Q8TEF2 133 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 RBMXL1Q96E39 390 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 AKR1E2Q96JD6 320 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 OR10C1Q96KK4 312 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 OR8B2Q96RD0 313 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF251Q9BRH9 671 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 ABHD14AQ9BUJ0 271 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 CHIAQ9BZP6 476 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM222Q9H0R3 208 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 SDHAF2Q9NX18 166 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 LPAR3Q9UBY5 353 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 KCNS2Q9ULS6 477 aa5.65□□□□□ -1.5
TOPBP1-203ENST00000503464 TACC2O95359 2948 aa5.65□□□□□ -1.51
TOPBP1-203ENST00000503464 CR1P17927 2039 aa5.65□□□□□ -1.51
TOPBP1-203ENST00000503464 CELSR2Q9HCU4 2923 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 IGHV4-30-2A0A087WSY4 118 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 A0A087X0M5 115 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SAA2-SAA4A0A096LPE2 208 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 A0A1B0GX30 115 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 LINC00473A8K010 186 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 RAMP3O60896 148 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 C1QBP02746 253 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SAA2P0DJI9 122 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 NFYBP25208 207 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 EIF2B2P49770 351 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 GZMKP49863 264 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 GNG10P50151 68 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 PDLIM4P50479 330 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 IL15RAQ13261 267 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 MSMO1Q15800 293 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 TMEM30BQ3MIR4 351 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 Q3ZCU0 254 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 RPL39P5Q59GN2 51 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 LAMTOR1Q6IAA8 161 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SLC25A48Q6ZT89 311 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 LYZL2Q7Z4W2 148 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 FAM219AQ8IW50 185 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SELENOHQ8IZQ5 122 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 Q8N7P7 452 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SLC35G3Q8N808 338 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 OR10A7Q8NGE5 316 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 OR51H1Q8NH63 302 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 COQ8AQ8NI60 647 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 ZNF596Q8TC21 504 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 NINJ1Q92982 152 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SEC22AQ96IW7 307 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 TMEM56Q96MV1 263 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SSBP3Q9BWW4 388 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 SUCNR1Q9BXA5 334 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 GAL3ST2Q9H3Q3 398 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 RAB18Q9NP72 206 aa5.64□□□□□ -1.51
TOPBP1-203ENST00000503464 TMEM56-RWDD3S4R434 201 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms