RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TMEM56-RWDD3S4R434 201 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 USF3Q68DE3 2245 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV3-43A0A0B4J1X8 118 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 C5orf51A6NDU8 294 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 A8MXK9 166 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ENSAO43768 121 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 NDUFS7O75251 213 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 FOXH1O75593 365 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV2-5P01817 119 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 PET100P0DJ07 73 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV1-8P0DP01 117 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV3-43DP0DP04 118 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 CXCL3P19876 107 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 OMGP23515 440 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 NFYBP25208 207 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 IL3RAP26951 378 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 DLX6P56179 175 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ERVFRD-1P60508 538 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 LTC4SQ16873 150 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ANKRD55Q3KP44 614 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 PRAMEF5Q5TYX0 476 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 FAM71F2Q6NXP2 309 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 C1orf122Q6ZSJ8 110 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC25A48Q6ZT89 311 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF695Q8IW36 515 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 LRRC75A-AS1Q8N1F1 130 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 DRAM1Q8N682 238 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 KIR3DL3Q8N743 410 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF525Q8N782 197 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF596Q8TC21 504 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 GLYATL2Q8WU03 294 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 RBPMSQ93062 196 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 MSI2Q96DH6 328 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 HYLS1Q96M11 299 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 S1PR3Q99500 378 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 SPIN2AQ99865 258 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 SPIN2BQ9BPZ2 258 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 NMES1Q9C002 83 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 BPESC1Q9GZL8 116 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ZFP57Q9NU63 452 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 COMMD9Q9P000 198 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 PRELID3BQ9Y3B1 194 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 MYO18BQ8IUG5 2567 aa6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 USP9XQ93008 2570 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-202ENST00000503338 ST8SIA5O15466 376 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 RBFOX2O43251 390 aaKnown RBP eCLIP6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 FCN3O75636 299 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 CDS2O95674 445 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 IGLV2-14P01704 120 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC25A6P12236 298 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC25A16P16260 332 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 CCL3L1P16619 93 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 VDAC1P21796 283 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 DNASE1P24855 282 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 EIF2B2P49770 351 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 PRRX1P54821 245 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 NOXA1Q86UR1 476 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 FAM219AQ8IW50 185 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 FGFRL1Q8N441 504 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF439Q8NDP4 499 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 OR13D1Q8NGV5 346 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 OR2T35Q8NGX2 323 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 OR51H1Q8NH63 302 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 OR9G1Q8NH87 305 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 C10orf105Q8TEF2 133 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 ZDHHC16Q969W1 377 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 MARVELD3Q96A59 401 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 TMEM186Q96B77 213 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 C18orf12Q96KH6 178 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 C2orf50Q96LR7 162 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 FYTTD1Q96QD9 318 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 TP53RKQ96S44 253 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 TMEM133Q9H2Q1 129 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 IFI27L2Q9H2X8 130 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 SDHAF2Q9NX18 166 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 POLR3KQ9Y2Y1 108 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 AMMECR1Q9Y4X0 333 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 KPTNQ9Y664 436 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 MALRD1Q5VYJ5 2156 aa6.68□□□□□ -1.34
TOPBP1-202ENST00000503338 DSCAML1Q8TD84 2053 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 C13orf42A0A1B0GVH6 325 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 A8MV72 311 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 FAM25EA8MYX2 175 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 VWC2LB2RUY7 222 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 J3QR06 171 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 TOR1AO14656 332 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 TNFSF12O43508 249 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 RRASP10301 218 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 C4BPBP20851 252 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 DUTP33316 252 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 THBS3P49746 956 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 GZMKP49863 264 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 ARHGDIBP52566 201 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF137PP52743 207 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 H2BFSP57053 126 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 EIF4EBP1Q13541 118 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 SP6Q3SY56 376 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms