RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 RHEBQ15382 184 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 KRBOX4Q5JUW0 171 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 C1orf185Q5T7R7 199 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 TMEM88Q6PEY1 159 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 Q6ZS92 163 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 TMEM217Q8N7C4 229 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 C15orf54Q8N8G6 183 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PARP12Q9H0J9 701 aaKnown RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 OR2D2Q9H210 308 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PSENENQ9NZ42 101 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PRELID3BQ9Y3B1 194 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 ATXN7O15265 892 aaPredicted RBP10.06□□□□□ -0.8
NUP54-202ENST00000502850 TSPAN9O75954 239 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 IGKV1-39P01597 117 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 IGKV1-5P01602 117 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 IGKV1D-39P04432 117 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 TIMP3P35625 211 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 CFHR2P36980 270 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 FABP6P51161 128 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 HTD2P86397 168 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 ZNF585BQ52M93 769 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 PRAMEF6Q5VXH4 476 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 CBLN2Q8IUK8 224 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 OR1L1Q8NH94 360 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 CD300LFQ8TDQ1 290 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 MUCL1Q96DR8 90 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 HSD17B10Q99714 261 aaKnown RBP10.06□□□□□ -0.8
NUP54-202ENST00000502850 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 LAMA5O15230 3695 aa10.06□□□□□ -0.8
NUP54-202ENST00000502850 TRAV39A0A0B4J263 110 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 CRYAAP02489 173 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 FHITP49789 147 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 ASCL1P50553 236 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 SERF2P84101 59 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 COL10A1Q03692 680 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 Q6ZR03 302 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 ZNF826PQ6ZT77 177 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 LILRB2Q8N423 598 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 COQ2Q96H96 371 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 CIB3Q96Q77 187 aaPredicted RBP10.05□□□□□ -0.8
NUP54-202ENST00000502850 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
NUP54-202ENST00000502850 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 RBFOX3A6NFN3 312 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 C9JQL5 133 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 WNT9BO14905 357 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 C1QL1O75973 258 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 F12P00748 615 aaPredicted RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 IGHV3-13P01766 116 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 GLRXP35754 106 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 CEBPDP49716 269 aaPredicted RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 KLF3P57682 345 aaPredicted RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 AESQ08117 197 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 ATP6V1FQ16864 119 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 KRTCAP3Q53RY4 240 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 AVPI1Q5T686 147 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 FGFRL1Q8N441 504 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 MSL2Q9HCI7 577 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 HSPB7Q9UBY9 170 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 FASNP49327 2511 aaKnown RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 MGST3O14880 152 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 NXPH3O95157 252 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 CLDN14O95500 239 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 PRB1P04280 392 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 FOLR2P14207 255 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 GZMHP20718 246 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 PRDX2P32119 198 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 PPP1CCP36873 323 aaKnown RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 SELENOVP59797 346 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 UBE2KP61086 200 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 TMEM267Q0VDI3 215 aaPredicted RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 EIF4EBP1Q13541 118 aaPredicted RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 Q6ZRM9 215 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 OR2Z1Q8NG97 314 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 MRGPRDQ8TDS7 321 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 TCTEX1D2Q8WW35 142 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 SNX22Q96L94 193 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.04□□□□□ -0.8
NUP54-202ENST00000502850 UFSP2Q9NUQ7 469 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 FBXO7Q9Y3I1 522 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 TIMM9Q9Y5J7 89 aa10.04□□□□□ -0.8
NUP54-202ENST00000502850 LOC400499M0QZD8 3231 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 CHD3Q12873 2000 aaKnown RBP10.03□□□□□ -0.8
NUP54-202ENST00000502850 BAHCC1Q9P281 2608 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 IGHV3-64DA0A0J9YX35 117 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 FAM90A9PA6NNJ1 464 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 H3BP45 60 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 K7ENP7 123 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 M0R036 132 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms