RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 RDH12Q96NR8 316 aa11.19□□□□□ -0.62
SEC61A1-207ENST00000498837 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
SEC61A1-207ENST00000498837 RETNQ9HD89 108 aa11.19□□□□□ -0.62
SEC61A1-207ENST00000498837 RNF150Q9ULK6 438 aa11.19□□□□□ -0.62
SEC61A1-207ENST00000498837 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 A0A1W2PPK0 400 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 ARPC1BO15143 372 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 RGS11O94810 467 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 BAG2O95816 211 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 LALBAP00709 142 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 GLAP06280 429 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 CT45A6P0DMU7 189 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 CT45A5P0DMU8 189 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 CT45A7P0DMV0 189 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 AWAT2Q6E213 333 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 IL34Q6ZMJ4 242 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 ZNF554Q86TJ5 538 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 OR2AK2Q8NG84 335 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 APH1BQ8WW43 257 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 GALMQ96C23 342 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 SMIM19Q96E16 107 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 Q96M66 194 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 SLA2Q9H6Q3 261 aa11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 FGF20Q9NP95 211 aaPredicted RBP11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-207ENST00000498837 ANKRD34BA5PLL1 514 aa11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 CRTAPO75718 401 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 RPS11P62280 158 aaKnown RBP eCLIP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 CBR4Q8N4T8 237 aa11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 GHSRQ92847 366 aa11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 OR14A2Q96R54 314 aa11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 FAM110AQ9BQ89 295 aa11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 THAP7Q9BT49 309 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 PARP12Q9H0J9 701 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 TUBA4BQ9H853 241 aa11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 RANGRFQ9HD47 186 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-207ENST00000498837 H0YJW9 148 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 H7C2Y5 167 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 PDCD6O75340 191 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 CA2P00918 260 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 TFAP2AP05549 437 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 ZP3P21754 424 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 CD40LGP29965 261 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 PSG5Q15238 335 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 HMGN3Q15651 99 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 Q499Y3 187 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 C6orf141Q5SZD1 244 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 TMPRSS11AQ6ZMR5 421 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 IL1F10Q8WWZ1 152 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 ABHD14BQ96IU4 210 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 BABAM2Q9NXR7 383 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 PIPOXQ9P0Z9 390 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 METTL1Q9UBP6 276 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 CKLFQ9UBR5 152 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 ADAM30Q9UKF2 790 aa11.16□□□□□ -0.62
SEC61A1-207ENST00000498837 FRAS1Q86XX4 4008 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 LOC100130705A0A1B0GUX0 176 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 IZUMO1RA6ND01 250 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 OR5H14A6NHG9 310 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 H0Y980 276 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 H3BNX3 289 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 RAB29O14966 203 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 FSTP19883 344 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 MC5RP33032 325 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 SYNJ2BPP57105 145 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 OR5T1Q8NG75 326 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 FAM46BQ96A09 425 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 SLC29A1Q99808 456 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 CLEC2DQ9UHP7 191 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 LRRC42Q9Y546 428 aa11.15□□□□□ -0.62
SEC61A1-207ENST00000498837 C13orf42A0A1B0GVH6 325 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 WBP4O75554 376 aaKnown RBP11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 RBBP9O75884 186 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 DCKP27707 260 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 RASSF2P50749 326 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 LINC00205P59089 165 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 DEFA5Q01523 94 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 GTSCR1Q86UQ5 136 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 POC5Q8NA72 575 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 OR5AN1Q8NGI8 311 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 PGLYRP3Q96LB9 341 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 FAAP24Q9BTP7 215 aa11.14□□□□□ -0.63
SEC61A1-207ENST00000498837 HIPK2Q9H2X6 1198 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms