RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FAUP35544 74 aaKnown RBP17.66■□□□□ 0.42
C9orf3-222ENST00000496567 ZNF57Q68EA5 555 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-222ENST00000496567 LYG1Q8N1E2 194 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 ARRDC1Q8N5I2 433 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 AGMATQ9BSE5 352 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 PALMDQ9NP74 551 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 PIPOXQ9P0Z9 390 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 ZNRD1Q9P1U0 126 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 FAM96BQ9Y3D0 163 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 SONP18583 2426 aaKnown RBP17.66■□□□□ 0.42
C9orf3-222ENST00000496567 OR8U9P0C7N5 309 aa17.65■□□□□ 0.42
C9orf3-222ENST00000496567 LUMP51884 338 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-222ENST00000496567 KLF9Q13886 244 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-222ENST00000496567 LHFPL4Q7Z7J7 247 aa17.65■□□□□ 0.42
C9orf3-222ENST00000496567 OR8U1Q8NH10 309 aa17.65■□□□□ 0.42
C9orf3-222ENST00000496567 MALSU1Q96EH3 234 aa17.65■□□□□ 0.42
C9orf3-222ENST00000496567 ZNF2Q9BSG1 426 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-222ENST00000496567 IFI27L2Q9H2X8 130 aa17.65■□□□□ 0.42
C9orf3-222ENST00000496567 DISC1C4P0D8 188 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 RAB29O14966 203 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 PPYP01298 95 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 AADACP22760 399 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 HERV-K104P61576 105 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF660Q6AZW8 331 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-222ENST00000496567 OR4C16Q8NGL9 310 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF221Q9UK13 617 aa17.64■□□□□ 0.41
C9orf3-222ENST00000496567 A0A0U1RQK1 487 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 AMY2AP04746 511 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF137PP52743 207 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 OR4D10Q8NGI6 311 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 RPEQ96AT9 228 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 RNF150Q9ULK6 438 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 NAV3Q8IVL0 2385 aa17.63■□□□□ 0.41
C9orf3-222ENST00000496567 OOSP1A8MZH6 123 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 LY6LH3BQJ8 138 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 SLC22A5O76082 557 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 FBP1P09467 338 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 GPR12P47775 334 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 LDLRAD2Q5SZI1 272 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 TPTE2P1Q5T6R2 138 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 C22orf15Q8WYQ4 148 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 ABHD14BQ96IU4 210 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 S1PR3Q99500 378 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 SLC6A7Q99884 636 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 OR2D2Q9H210 308 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 CRLF1O75462 422 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 FXYD4P59646 89 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 SSX2Q16385 188 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 CCDC144NLQ6NUI1 221 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 FAAP20Q6NZ36 180 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 ODF3L1Q8IXM7 274 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 BCL6BQ8N143 479 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-222ENST00000496567 OR56B4Q8NH76 319 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 C17orf50Q8WW18 174 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 TOMM40LQ969M1 308 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 ST6GALNAC6Q969X2 333 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 MOB3AQ96BX8 217 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 AJUBAQ96IF1 538 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 HRASLSQ9HDD0 168 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 MCUBQ9NWR8 336 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 GAB2Q9UQC2 676 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 HILPDAQ9Y5L2 63 aa17.62■□□□□ 0.41
C9orf3-222ENST00000496567 SAA2-SAA4A0A096LPE2 208 aa17.61■□□□□ 0.41
C9orf3-222ENST00000496567 HSD17B6O14756 317 aa17.61■□□□□ 0.41
C9orf3-222ENST00000496567 GAPDHP04406 335 aaKnown RBP17.61■□□□□ 0.41
C9orf3-222ENST00000496567 SAA2P0DJI9 122 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-222ENST00000496567 FAM71F2Q6NXP2 309 aa17.61■□□□□ 0.41
C9orf3-222ENST00000496567 PRRT1Q99946 306 aa17.61■□□□□ 0.41
C9orf3-222ENST00000496567 IGKV1D-13A0A0B4J2D9 117 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 CENPXA8MT69 81 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 TXNL1O43396 289 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF735P0CB33 412 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 IGKV1-13P0DP09 117 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 ARHGDIBP52566 201 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF816Q0VGE8 651 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-222ENST00000496567 SCGB2B2Q4G0G5 96 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF645Q8N7E2 425 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 TERB2Q8NHR7 220 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 SECTM1Q8WVN6 248 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 C7orf50Q9BRJ6 194 aaKnown RBP17.6■□□□□ 0.41
C9orf3-222ENST00000496567 MEGF9Q9H1U4 602 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 SCP2D1Q9UJQ7 156 aa17.6■□□□□ 0.41
C9orf3-222ENST00000496567 ANK3Q12955 4377 aaKnown RBP17.6■□□□□ 0.41
C9orf3-222ENST00000496567 NSD1Q96L73 2696 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-222ENST00000496567 DEFB112Q30KQ8 113 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 LPCAT3Q6P1A2 487 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 ZNF833PQ6ZTB9 187 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 LDLRAD3Q86YD5 345 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 TGIF2LXQ8IUE1 241 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 SLC5A7Q9GZV3 580 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 SLC2A8Q9NY64 477 aa17.59■□□□□ 0.41
C9orf3-222ENST00000496567 SOX21Q9Y651 276 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-222ENST00000496567 NAP1L6A6NFF2 107 aa17.58■□□□□ 0.41
C9orf3-222ENST00000496567 FAM157CP0CG43 387 aa17.58■□□□□ 0.41
C9orf3-222ENST00000496567 LHFPL1Q86WI0 220 aa17.58■□□□□ 0.41
C9orf3-222ENST00000496567 OR8H3Q8N146 312 aa17.58■□□□□ 0.41
C9orf3-222ENST00000496567 DYNAPQ8N1N2 210 aa17.58■□□□□ 0.41
C9orf3-222ENST00000496567 OR51S1Q8NGJ8 323 aa17.58■□□□□ 0.41
C9orf3-222ENST00000496567 RTN4IP1Q8WWV3 396 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms