RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SPRNQ5BIV9 151 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 LIAT1Q6ZQX7 453 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 CENPSQ8N2Z9 138 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 CHPT1Q8WUD6 406 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 RNF166Q96A37 237 aaPredicted RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 FLYWCH2Q96CP2 140 aaKnown RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 C17orf98A8MV24 154 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 C22orf46C9J442 243 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 ITGB1BP1O14713 200 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 HRH1P35367 487 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 TGFBR1P36897 503 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 RBMS2Q15434 407 aaKnown RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 IDO2Q6ZQW0 420 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 OR52L2PQ8NGH6 319 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 GPX8Q8TED1 209 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 COMMD9Q9P000 198 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 OR5H14A6NHG9 310 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 LDLRAD4O15165 306 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 LY6G6DO95868 133 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 FAM157CP0CG43 387 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 PVALBP20472 110 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 NFYAP23511 347 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 RFX2P48378 723 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 PAX8Q06710 450 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 HMGN3Q15651 99 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 FAM71F2Q6NXP2 309 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 OR4A16Q8NH70 328 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 OR2T6Q8NHC8 308 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 TERB2Q8NHR7 220 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 PRSS22Q9GZN4 317 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 TNFRSF19Q9NS68 423 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF230Q9UIE0 474 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 KCNAB3O43448 404 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 GSTZ1O43708 216 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 LGALS7P47929 136 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 PAX5Q02548 391 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 C16orf82Q7Z2V1 217 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 COQ2Q96H96 371 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 SLIRPQ9GZT3 109 aaKnown RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 FGF23Q9GZV9 251 aaPredicted RBP7.1□□□□□ -1.27
U2AF1-212ENST00000496462 FKBP11Q9NYL4 201 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 PPYP01298 95 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 RLN2P04090 185 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 RGS21Q2M5E4 152 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 HLA-DRB5Q30154 266 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 GIMAP1Q8WWP7 306 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 C22orf15Q8WYQ4 148 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 DYRK2Q92630 601 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 SLC25A38Q96DW6 304 aa7.1□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM86BQ8N661 226 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 COMMD5Q9GZQ3 224 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 HRNRQ86YZ3 2850 aaPredicted RBP7.09□□□□□ -1.27
U2AF1-212ENST00000496462 A0A1B0GVG6 124 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 M0QYG6 137 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 SSNA1O43805 119 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 AKR1C4P17516 323 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM50BP56557 158 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 MMDQ15546 238 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 VAX1Q5SQQ9 334 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 H2BFWTQ7Z2G1 175 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 LGI3Q8N145 548 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 IGFBPL1Q8WX77 278 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 HDHD3Q9BSH5 251 aaPredicted RBP7.09□□□□□ -1.27
U2AF1-212ENST00000496462 HINT2Q9BX68 163 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 MMP26Q9NRE1 261 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 POMT1Q9Y6A1 747 aa7.09□□□□□ -1.27
U2AF1-212ENST00000496462 LYRM1O43325 122 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 NAPSAO96009 420 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 SCTP09683 121 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 QRFPP83859 136 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 DGCR2P98153 550 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 TPTE2P1Q5T6R2 138 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 Q6ZS49 121 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 LINC00311Q8N616 119 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 ZNF645Q8N7E2 425 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 C8orf31Q8N9H6 132 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 RNF5Q99942 180 aa7.09□□□□□ -1.28
U2AF1-212ENST00000496462 UNKLQ9H9P5 680 aaKnown RBP7.09□□□□□ -1.28
U2AF1-212ENST00000496462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.08□□□□□ -1.28
U2AF1-212ENST00000496462 A0A1B0GUS0 222 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 LANCL1O43813 399 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 PRAF2O60831 178 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 IGHV3-7P01780 117 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 CD37P11049 281 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 RPA2P15927 270 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SAA4P35542 130 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SUB1P53999 127 aaKnown RBP eCLIP7.08□□□□□ -1.28
U2AF1-212ENST00000496462 HNF4GQ14541 408 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 MOGAT2Q3SYC2 334 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 MORN2Q502X0 79 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 LY6G6FQ5SQ64 297 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SLC25A42Q86VD7 318 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 OR51H1Q8NH63 302 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SSX3Q99909 188 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SMR3AQ99954 134 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 C11orf54Q9H0W9 315 aaPredicted RBP7.08□□□□□ -1.28
U2AF1-212ENST00000496462 MBNL3Q9NUK0 354 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms