RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TMEM272A0A1B0GTI8 110 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 TRDV1A0A1B0GX56 115 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 OR5H14A6NHG9 310 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 IFITM5A6NNB3 132 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 NBR2O15453 112 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 ST8SIA5O15466 376 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 HLA-DRB1P01911 266 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 ELANEP08246 267 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 IGLL1P15814 213 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 ZBTB25P24278 435 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 THBS3P49746 956 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 VEGFCP49767 419 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 PNLIPRP3Q17RR3 467 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 ZNF695Q8IW36 515 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 CMSS1Q9BQ75 279 aaKnown RBP12.36□□□□□ -0.43
HDAC4-213ENST00000496347 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-213ENST00000496347 Q9N2K0 584 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 RAB22AQ9UL26 194 aa12.36□□□□□ -0.43
HDAC4-213ENST00000496347 LINC01548A6NM66 108 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 HSPA12AO43301 675 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 DENRO43583 198 aaKnown RBP12.35□□□□□ -0.43
HDAC4-213ENST00000496347 DIRAS3O95661 229 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 IGHG4P01861 327 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-213ENST00000496347 RAB6AP20340 208 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 C2orf76Q3KRA6 126 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 PLAC9Q5JTB6 97 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 HES5Q5TA89 166 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 FOXB2Q5VYV0 432 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 C8orf86Q6ZUL3 223 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 C5orf24Q7Z6I8 188 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
HDAC4-213ENST00000496347 PTX4Q96A99 478 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 PECRQ9BY49 303 aa12.35□□□□□ -0.43
HDAC4-213ENST00000496347 AURKAIP1Q9NWT8 199 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-213ENST00000496347 NDUFA3O95167 84 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 PRB2P02812 416 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-213ENST00000496347 GADD45AP24522 165 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 MYCNOSP40205 109 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 SERPINB10P48595 397 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 TMEM50BP56557 158 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 OR10A3P58181 314 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 MRPS15P82914 257 aaKnown RBP12.34□□□□□ -0.43
HDAC4-213ENST00000496347 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 FAM131AQ6UXB0 335 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 NPBQ8NG41 125 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 OR8U1Q8NH10 309 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 DPF1Q92782 380 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 P2RX4Q99571 388 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 AGMATQ9BSE5 352 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
HDAC4-213ENST00000496347 PARP12Q9H0J9 701 aaKnown RBP12.34□□□□□ -0.43
HDAC4-213ENST00000496347 OR1A1Q9P1Q5 309 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
HDAC4-213ENST00000496347 SHISA3A0PJX4 238 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 TRDCB7Z8K6 153 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 RBBP9O75884 186 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 RAB3BP20337 219 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 PSMB8P28062 276 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 MC5RP33032 325 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 KIR2DS1Q14954 304 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 OR5AN1Q8NGI8 311 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 OR4A4PQ8NGN8 299 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 MRAPQ8TCY5 172 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 KCTD7Q96MP8 289 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
HDAC4-213ENST00000496347 WASHC3Q9Y3C0 194 aa12.33□□□□□ -0.44
HDAC4-213ENST00000496347 H0YJW9 148 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 MFNGO00587 321 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
HDAC4-213ENST00000496347 SCTP09683 121 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CD3GP09693 182 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CT45A6P0DMU7 189 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CT45A5P0DMU8 189 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CT45A7P0DMV0 189 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 HIST1H1DP16402 221 aaKnown RBP12.32□□□□□ -0.44
HDAC4-213ENST00000496347 PSMB9P28065 219 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 FGF9P31371 208 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CEACAM6P40199 344 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-213ENST00000496347 EGFEM1PQ0D2K5 195 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 C22orf42Q6IC83 251 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 SPARTQ8N0X7 666 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-213ENST00000496347 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 MYOZ3Q8TDC0 251 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 C11orf54Q9H0W9 315 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-213ENST00000496347 OR51J1Q9H342 316 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
HDAC4-213ENST00000496347 IGHV7-81A0A0B4J1V7 117 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 IGKV1-6A0A0C4DH72 117 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms