RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 DUX5Q96PT3 197 aa4.54□□□□□ -1.68
NF1-216ENST00000495910 SDF2Q99470 211 aa4.54□□□□□ -1.68
NF1-216ENST00000495910 IL36RNQ9UBH0 155 aa4.54□□□□□ -1.68
NF1-216ENST00000495910 SLC25A10Q9UBX3 287 aaPredicted RBP4.54□□□□□ -1.68
NF1-216ENST00000495910 NWD2Q9ULI1 1742 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 MGST3O14880 152 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 HOXB1P14653 301 aaPredicted RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 RBM3P98179 157 aaKnown RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ZNF793Q6ZN11 406 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ZNF818PQ6ZRF7 136 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CCL17Q92583 94 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 NPCDR1Q9BY65 106 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 IGHV3-15A0A0B4J1V0 119 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 C9orf172C9J069 976 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CD5LO43866 347 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CEACAM4O75871 244 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 EGR1P18146 543 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 GABRG2P18507 467 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ZNF750Q32MQ0 723 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CCDC144NLQ6NUI1 221 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 TMEM25Q86YD3 366 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 MMD2Q8IY49 270 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 TDHQ8IZJ6 230 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 NABP2Q9BQ15 211 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 OR2H1Q9GZK4 316 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 INSIG2Q9Y5U4 225 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ATRNO75882 1429 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 FFAR1O14842 300 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 UMODP07911 640 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 C1QTNF9P0C862 333 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CXCL12P48061 93 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 TMEM50BP56557 158 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ASPHD2Q6ICH7 369 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 NPWQ8N729 165 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 MRPL24Q96A35 216 aaKnown RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 TMEM186Q96B77 213 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 TM4SF19Q96DZ7 209 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 JPT2Q9H910 190 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ZNF107Q9UII5 783 aaPredicted RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 KLF12Q9Y4X4 402 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CEACAM18A8MTB9 384 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 PTP4A3O75365 173 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 HSD52Q0P140 79 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 GAPTQ8N292 157 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ZNRF1Q8ND25 227 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 OR9G4Q8NGQ1 327 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 APOBEC4Q8WW27 367 aaKnown RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 MS4A6EQ96DS6 147 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 FRRS1LQ9P0K9 344 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 PXDNQ92626 1479 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 NKX2-6A6NCS4 301 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 LINC01387J3KSC0 135 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 HMGN4O00479 90 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 SSTR5P35346 364 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 GLIPR1P48060 266 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 PIANPQ8IYJ0 282 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 MRGPRX1Q96LB2 322 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 PRDM13Q9H4Q3 707 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ZNFX1Q9P2E3 1918 aaKnown RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 N4BP2Q86UW6 1770 aaPredicted RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 SYNGR1O43759 233 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 NKX2-2O95096 273 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 HOXD4P09016 255 aaPredicted RBP4.53□□□□□ -1.68
NF1-216ENST00000495910 RPS11P62280 158 aaKnown RBP eCLIP4.53□□□□□ -1.68
NF1-216ENST00000495910 GAGE1Q13065 139 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 GAGE4Q13068 117 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 GAGE5Q13069 117 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 GAGE6Q13070 117 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 CCSMST1Q4G0I0 132 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 PMS2CLQ68D20 193 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 PCSK4Q6UW60 755 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 VGLL2Q8N8G2 317 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 NDUFAF3Q9BU61 184 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 TMEM126AQ9H061 195 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 MS4A5Q9H3V2 200 aa4.53□□□□□ -1.68
NF1-216ENST00000495910 ICOSLGO75144 302 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
NF1-216ENST00000495910 CAPZBP47756 277 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 PRSS53Q2L4Q9 553 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 C1orf122Q6ZSJ8 110 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 SPSB4Q96A44 273 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 NRSN2Q9GZP1 204 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 SLC26A1Q9H2B4 701 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 SIGLEC1Q9BZZ2 1709 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 PIK3C2AO00443 1686 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 TRAV30A0A087WSZ9 112 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 EPPINO95925 133 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 SP9P0CG40 484 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 GZMHP20718 246 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 RPS27P42677 84 aaKnown RBP4.52□□□□□ -1.69
NF1-216ENST00000495910 PPICP45877 212 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 C12orf76Q8N812 135 aaPredicted RBP4.52□□□□□ -1.69
NF1-216ENST00000495910 FGF14Q92915 247 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 ZNF385AQ96PM9 386 aaKnown RBP4.52□□□□□ -1.69
NF1-216ENST00000495910 NEUROG3Q9Y4Z2 214 aa4.52□□□□□ -1.69
NF1-216ENST00000495910 SHROOM3Q8TF72 1996 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms