RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZNF695Q8IW36 515 aa19.04■□□□□ 0.64
HLA-C-209ENST00000495835 MRPL41Q8IXM3 137 aaKnown RBP19.04■□□□□ 0.64
HLA-C-209ENST00000495835 ZNF251Q9BRH9 671 aa19.04■□□□□ 0.64
HLA-C-209ENST00000495835 MCRIP2Q9BUT9 160 aaKnown RBP19.04■□□□□ 0.64
HLA-C-209ENST00000495835 PECRQ9BY49 303 aa19.04■□□□□ 0.64
HLA-C-209ENST00000495835 MRPL20Q9BYC9 149 aaKnown RBP19.04■□□□□ 0.64
HLA-C-209ENST00000495835 Q9N2K0 584 aa19.04■□□□□ 0.64
HLA-C-209ENST00000495835 ZNF107Q9UII5 783 aaPredicted RBP19.04■□□□□ 0.64
HLA-C-209ENST00000495835 TRDV1A0A1B0GX56 115 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 ATP6V1G2O95670 118 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 IGHG4P01861 327 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 HLA-DRB1P01911 266 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 VDAC1P21796 283 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 MC5RP33032 325 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 OR3A3P47888 321 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 CDX1P47902 265 aaPredicted RBP19.03■□□□□ 0.64
HLA-C-209ENST00000495835 HLA-DRB3P79483 266 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 CFHR3Q02985 330 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 KLHL30-AS1Q8NEE0 82 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 NPBQ8NG41 125 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 ARHGAP5-AS1Q96IT6 56 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 CMSS1Q9BQ75 279 aaKnown RBP19.03■□□□□ 0.64
HLA-C-209ENST00000495835 HSPB9Q9BQS6 159 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 AGMATQ9BSE5 352 aa19.03■□□□□ 0.64
HLA-C-209ENST00000495835 AURKAIP1Q9NWT8 199 aaPredicted RBP19.03■□□□□ 0.64
HLA-C-209ENST00000495835 NUDT19A8MXV4 375 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 NBR2O15453 112 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 CEACAM6P40199 344 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 CLDN12P56749 244 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 PTX4Q96A99 478 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 P2RX4Q99571 388 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 YTHDF1Q9BYJ9 559 aaKnown RBP19.02■□□□□ 0.64
HLA-C-209ENST00000495835 Q9H521 79 aa19.02■□□□□ 0.64
HLA-C-209ENST00000495835 OR5H14A6NHG9 310 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 HSPA12AO43301 675 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 NDUFA3O95167 84 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 PRB2P02812 416 aaPredicted RBP19.01■□□□□ 0.63
HLA-C-209ENST00000495835 MYL9P24844 172 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 C8orf86Q6ZUL3 223 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 MRAPQ8TCY5 172 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 RNF5Q99942 180 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 KIAA1456Q9P272 454 aa19.01■□□□□ 0.63
HLA-C-209ENST00000495835 TMEM272A0A1B0GTI8 110 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 IFITM5A6NNB3 132 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 ST8SIA5O15466 376 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 RBBP9O75884 186 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 RAB6AP20340 208 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 MRPS15P82914 257 aaKnown RBP19■□□□□ 0.63
HLA-C-209ENST00000495835 KIR2DS1Q14954 304 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 C5orf64Q2M2E5 130 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 PLAC9Q5JTB6 97 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 HES5Q5TA89 166 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 UBE2UQ5VVX9 321 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 HDHD3Q9BSH5 251 aaPredicted RBP19■□□□□ 0.63
HLA-C-209ENST00000495835 TOLLIPQ9H0E2 274 aa19■□□□□ 0.63
HLA-C-209ENST00000495835 TRDCB7Z8K6 153 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 DIRAS3O95661 229 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 RPLP1P05386 114 aaKnown RBP18.99■□□□□ 0.63
HLA-C-209ENST00000495835 CT45A6P0DMU7 189 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 CT45A5P0DMU8 189 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 CT45A7P0DMV0 189 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 RAB3BP20337 219 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 GADD45AP24522 165 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 SERPINB10P48595 397 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 EGFEM1PQ0D2K5 195 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 LIN54Q6MZP7 749 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 DPF1Q92782 380 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 RAB3CQ96E17 227 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 KCTD7Q96MP8 289 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 CENPOQ9BU64 300 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 C11orf54Q9H0W9 315 aaPredicted RBP18.99■□□□□ 0.63
HLA-C-209ENST00000495835 OR51J1Q9H342 316 aa18.99■□□□□ 0.63
HLA-C-209ENST00000495835 ZMAT5Q9UDW3 170 aaKnown RBP18.99■□□□□ 0.63
HLA-C-209ENST00000495835 SCTP09683 121 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 SLC2A2P11168 524 aaPredicted RBP18.98■□□□□ 0.63
HLA-C-209ENST00000495835 PSMB8P28062 276 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 PPIFP30405 207 aaKnown RBP18.98■□□□□ 0.63
HLA-C-209ENST00000495835 C18orf65Q6ZTR6 163 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 OR5AN1Q8NGI8 311 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 OR4A4PQ8NGN8 299 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 OR8U1Q8NH10 309 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 FCGR1BQ92637 280 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 RITA1Q96K30 269 aa18.98■□□□□ 0.63
HLA-C-209ENST00000495835 METTL21EPA6NDL7 271 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 CCL24O00175 119 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 CD3GP09693 182 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 FGF9P31371 208 aaPredicted RBP18.97■□□□□ 0.63
HLA-C-209ENST00000495835 ARL6IP1Q15041 203 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 RPL39P5Q59GN2 51 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 OR10R2Q8NGX6 335 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 ABHD14BQ96IU4 210 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 OR1A1Q9P1Q5 309 aa18.97■□□□□ 0.63
HLA-C-209ENST00000495835 IGHV7-81A0A0B4J1V7 117 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 SHISA3A0PJX4 238 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 H0YJW9 148 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 CNTFRP26992 372 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 ZNF660Q6AZW8 331 aaPredicted RBP18.96■□□□□ 0.63
HLA-C-209ENST00000495835 FAM131AQ6UXB0 335 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 SPARTQ8N0X7 666 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 MYOZ3Q8TDC0 251 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms